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Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
# Conflicts: # .github/workflows/tests.yml # README.md # examples/01_basic/08_simulate_force.py # myogen/simulator/__init__.py
Port of upstream 2b72066 to the JAX Hill port: defTetanicParam now returns the max post-sigmoid force at the unit's saturation frequency instead of the 1 Hz twitch response. Verified numerically identical to the rebuilt Cython _hill implementation. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Removes files that are working-session artifacts rather than project deliverables, ahead of opening the PR: - debug_channel_check.py, diag_fi_curve.py (scratch debug scripts) - docs/session_notes/* except the NERLab architecture migration note, which is referenced from experiments/twin/poolbuild.py - docs/DIGITAL_TWIN_ROADMAP.md (superseded by _REVISED) - experiments/twin/evidence: keep only the 10 final full runs that back documented claims; drop smoke runs, superseded re-runs, and the partial gradient_repair iterations All removed files are retained locally and are now gitignored so a subsequent 'git add -A' cannot silently re-add them. Fixes the now-dangling roadmap reference in experiments/twin/README.md. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
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A JAX/Jaxley-based neuromuscular simulation framework for motor-unit activity, muscle force, proprioception, joint dynamics, and EMG, with differentiable optimization paths for key neural, muscle, and control parameters.