MNase-seq analysis pipeline using BWA and DANPOS2.
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Feb 23, 2026 - Nextflow
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nucleosome
Here are 7 public repositories matching this topic...
scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis
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Jul 29, 2023 - R
A flexible and sensitive method for capturing and integrating multimodal epigenetic information from cell-free DNA (cfDNA) using a single experimental assay.
python machine-learning bioinformatics pypi sequencing dna methylation epigenetics ensemble-learning wgbs cfdna fragmentation multimodal nucleosome em-seq stacking-ensemble computional-biology
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Sep 7, 2026 - Jupyter Notebook
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Aug 15, 2021 - Perl
See the main fork of this repository here >>>
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Apr 29, 2020 - Nextflow
A nucleosomal reads counting tool
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Jan 27, 2022 - R
This pipeline has been superceeded. Please use >>>
bioinformatics pipeline nextflow bioinformatics-pipeline paired-end nucleosome-positioning nucleosome mnase-seq
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Sep 13, 2018 - Groovy
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