Skip to content
#

iedb

Star

Here are 5 public repositories matching this topic...

Language: All
Filter by language
All 5 Python 3 JavaScript 1 Jupyter Notebook 1

Qasim-Hussain-Code / peptide_mhc_binding_prediction

Star 0

HLA-A*02:01 nine-mer peptide binding prediction from sequence, with grouped validation and fully traceable metrics.

python machine-learning bioinformatics reproducible-research scikit-learn decision-trees hla data-quality immunoinformatics computational-immunology epitope-prediction interpretable-machine-learning vaccine-design neoantigen binding-affinity iedb peptide-mhc mhc-class-i
  • Updated Aug 16, 2026
  • Python

samavinasir / proteoannot

Star 0

Standalone Python package for annotating protein sequences with biological and physicochemical properties (iFeature, IEDB, SignalP) for reverse vaccinology. Extracted from VacSol-ML(ESKAPE); supports multi-allele MHC-I/II epitope prediction. Provides both a Python API and a CLI

machine-learning bioinformatics machine-learning-algorithms proteomics signal-peptides bioinformatics-analysis python-package epitope-prediction-methods protein-annotation bioinformatics-tool epitope-prediction vaccine-design reverse-vaccinology mhc-binding-prediction protein-annotations proteomics-data-analysis signal-peptide iedb ifeature signal-peptide-detection
  • Updated Jul 30, 2026
  • Python

Qasim-Hussain-Code / neoantigen_immunogenicity_prediction

Star 0

Chapter 6 of Machine Learning for Biology. Sequence-only immunogenicity prediction on 1,200 HLA-A*02:01 IEDB binders, cluster-split and pre-registered. Network 0.610 AUPRC, binding-only baseline 0.591, chance 0.485.

machine-learning bioinformatics tesla immunoinformatics computational-immunology neoantigen cancer-immunotherapy immunogenicity iedb t-cell-epitope peptide-mhc mhc-class-i hla-a0201
  • Updated Sep 20, 2026
  • Python

Add this topic to your repo

To associate your repository with the iedb topic, visit your repo's landing page and select "manage topics."

Learn more