This project is an automated pipeline to generate annotated gene expression atlases for kingdoms of life
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Dec 8, 2022 - Jupyter Notebook
#
coexpression
Here are 8 public repositories matching this topic...
AskoR pipeline: analysis of gene expression data, using edgeR.
gene-expression rnaseq transcriptomics gene-set-enrichment differential-expression multiple-comparisons coexpression
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May 19, 2026 - R
Platform that allows querying of mitochondrial-nuclear co-expression data, developed using Shiny
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Nov 15, 2021 - R
R package for tissue enrichment analysis using read-count or FPKM-value matrix
expression-analysis coexpression tissue-specific-genes tissue-enrichment-analysis tissue-expression fpkm-values gene-expression-analysis count-matrix tissue-enriched-genes co-expressed
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Sep 7, 2026 - R
Weighted Gene Co-expression Network Analysis (WGCNA) pipeline for identifying gene modules and hub genes from RNA-seq data
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May 20, 2026 - R
This project focuses on analyzing gene expression data from TCGA cancer data to derive associations among genes as well as disease phenotypes, co-expression signatures, and survival analysis.
cancer matlab gene-expression survival-analysis mutual-information tcga-data coexpression computational-genomics concordance-index
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Mar 25, 2023 - MATLAB
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