Snakemake

Popular repositories Loading

1. snakemake snakemake Public

   This is the development home of the workflow management system Snakemake. For general information, see

   Python 2.8k 654

2. snakemake-wrappers snakemake-wrappers Public

   This is the development home of the Snakemake wrapper repository, see

   Python 255 213

3. snakefmt snakefmt Public

   The uncompromising Snakemake code formatter

   Python 195 31

4. snakemake-github-action snakemake-github-action Public

   A Github action for running a Snakemake workflow

   63 15

5. snakemake-executor-plugin-slurm snakemake-executor-plugin-slurm Public

   A Snakemake executor plugin for submitting jobs to a SLURM cluster

   Python 54 56

6. snakemake-workflow-catalog snakemake-workflow-catalog Public

   A statically generated catalog of available Snakemake workflows

   Python 37 12