Refactoring contaminants to avoid non-const global - #128

Merged

andrewdavidsmith merged 7 commits into

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contaminant-set

Sep 21, 2026

Commits on Sep 21, 2026

src/fqrec.hpp and src/bamrec.cpp: cleanup
andrewdavidsmith
committed
60c6014
src/falco_utils.hpp: avoiding static analysis issue
andrewdavidsmith
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0b419a3
src/contaminants.hcpp: replaced a non-const global with a singleton class for the contaminants, now contaminant_set
andrewdavidsmith
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f1c1945
src/falco.cpp and src/duplication_results.cpp: changes for refactoring contaminants into contaminant_set
andrewdavidsmith
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c5323f8
CMakeLists.txt: updated contaminants to contaminat_set
andrewdavidsmith
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9202ae5
src/contaminant_set.hcpp: renaming
andrewdavidsmith
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0d349fe
src/contaminants.hcpp: removing
andrewdavidsmith
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09f4d75