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radmeth sample consistency between design and data matrix
- #294
#294
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andrewdavidsmith
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Sep 15, 2025
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radmeth sample consistency between design and data matrix
#294
andrewdavidsmith
merged 6 commits into
master
smithlabcode/dnmtools:master
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radmeth-sample-consistency
smithlabcode/dnmtools:radmeth-sample-consistency
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Commits on Sep 12, 2025
src/radmeth/radmeth_model.hpp: added a function to the Regression and Design classes to remove from the Design data structures any samples that do not appear in the big data matrix
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src/radmeth/radmeth_model.cpp: added the implementation of Design::order_samples which ensures consistent order between the design and the big data matrix, while also removing any samples from the …
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src/radmeth/radmeth.cpp: using the Regression::order_samples to ensure samples have the same order in the data matrix and the design matrix, rather than just throwing an error when recover should b…
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Commits on Sep 13, 2025
src/radmeth/radmeth_model.cpp: fixed the subsetting re-ordering of samples which was inverted
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src/radmeth/radmeth.cpp: putting the code to ensure sample order into a function
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Commits on Sep 15, 2025
src/radmeth/radmeth.cpp: using my own chisquared function instead of GSL; works very similarly
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