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  1. clinical-genomics-platform clinical-genomics-platform Public

    End-to-end germline variant-calling platform: Nextflow DSL2 pipeline benchmarked vs GIAB (SNV F1 0.9914), insert-only provenance, AWS CDK + Azure IaC, dbt/Airflow/Metabase, and guardrailed LLM vari…

    Python

  2. Detection-of-epistasis-patterns-in-genetic-data. Detection-of-epistasis-patterns-in-genetic-data. Public

    Detection of epistasis patterns using Memetic algorithm and Path Relinking method

  3. Microbial-interaction-inference Microbial-interaction-inference Public

    Jupyter Notebook

  4. oncoanalyser oncoanalyser Public

    Forked from nf-core/oncoanalyser

    A comprehensive cancer DNA/RNA analysis and reporting pipeline

    Nextflow

  5. merenlab/anvio merenlab/anvio Public

    An analysis and visualization platform for 'omics data

    Python 536 170

  6. umccr/sash umccr/sash Public

    UMCCR post-processing WGS workflow

    Nextflow 2