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Merge remote-tracking branch 'local/tmp_20260724194551' into dev tests #64: Commit fd75c16 pushed by frederic-mahe
26m 48s main
main
26m 48s
Merge remote-tracking branch 'local/tmp_20260724194551' into dev tests #63: Commit fd75c16 pushed by frederic-mahe
26m 44s dev
dev
26m 44s
chore: pin swarm 3.1.7 (revert the 3.1.8 bump) [S69] tests #62: Commit 2a29cb6 pushed by frederic-mahe
26m 55s main
main
26m 55s
chore: pin swarm 3.1.7 (revert the 3.1.8 bump) [S69] tests #61: Commit 2a29cb6 pushed by frederic-mahe
28m 15s dev
dev
28m 15s
feat: per-sample read/cluster tracking summary for Part B [S107] tests #60: Commit 0d45a40 pushed by frederic-mahe
3m 4s main
main
3m 4s
feat: per-sample read/cluster tracking summary for Part B [S107] tests #59: Commit 0d45a40 pushed by frederic-mahe
3m 11s dev
dev
3m 11s
test: end-to-end recluster nf-tests + fixture; bump to 0.4.0 [S102][S… tests #58: Commit 3a09097 pushed by frederic-mahe
25m 12s dev
dev
25m 12s
docs: frame fetch mode as convenience, recommend nf-core/fetchngs [S97] tests #57: Commit 86cde01 pushed by frederic-mahe
23m 50s dev
dev
23m 50s
Merge remote-tracking branch 'local/tmp_20260703105827' into dev tests #56: Commit f016202 pushed by frederic-mahe
23m 25s dev
dev
23m 25s
chore: release 0.3.0 [S77][S80] tests #55: Commit ae6ab24 pushed by frederic-mahe
24m 11s main
main
24m 11s
chore: release 0.3.0 [S77][S80] tests #54: Commit ae6ab24 pushed by frederic-mahe
24m 22s dev
dev
24m 22s
docs: document fetch mode (--accession) in the README [S97][S98] tests #53: Commit 3f5bf66 pushed by frederic-mahe
24m 10s dev
dev
24m 10s
docs: document the samplesheet / input-folder trust boundary [S70] tests #52: Commit bb21a6a pushed by frederic-mahe
21m 40s dev
dev
21m 40s
docs: add status badges to README tests #51: Commit fe83487 pushed by frederic-mahe
21m 38s dev
dev
21m 38s
fix: declare slurm_account/dataset_size_gb/reference_size_gb at top l… tests #50: Commit 4a7ee9d pushed by frederic-mahe
22m 3s dev
dev
22m 3s
fix: add require_slurm_account to nextflow_schema.json [S92] tests #49: Commit a0fd3e9 pushed by frederic-mahe
21m 5s dev
dev
21m 5s
feat: require --slurm_account on clusters that opt in; abims enforces… tests #48: Commit 4e431f7 pushed by frederic-mahe
22m 42s dev
dev
22m 42s
chore: release 0.2.0 [S77][S80] tests #47: Commit 6a8da20 pushed by frederic-mahe
20m 38s main
main
20m 38s
chore: release 0.2.0 [S77][S80] tests #46: Commit 6a8da20 pushed by frederic-mahe
21m 34s dev
dev
21m 34s
chore: gitignore nextflow DAG renders (pipeline.{dot,mmd,png,svg}) tests #45: Commit b5b1410 pushed by frederic-mahe
21m 18s dev
dev
21m 18s
feat: add --representatives_fasta fasta-input mode for Part C [S48][S… tests #44: Commit b1b0cbd pushed by frederic-mahe
16m 30s dev
dev
16m 30s
docs: reword two legacy comments for the parameterized thresholds [S1… tests #43: Commit b139e40 pushed by frederic-mahe
21m 1s dev
dev
21m 1s
fix: sort stampa _taxonomy_stampa.tsv in a real process, not collectF… tests #42: Commit f1a93a6 pushed by frederic-mahe
20m 39s dev
dev
20m 39s
test: drop conda.enabled assertion from engine profiles [S08] tests #41: Commit 496e6f3 pushed by frederic-mahe
19m 23s dev
dev
19m 23s
fix: match resourceLimits across NF 25.10/26 -flat renderings [S07] tests #40: Commit f7eb812 pushed by frederic-mahe
19m 3s dev
dev
19m 3s