I notice a few times that if I make a mistake, the error message will be printed immediately but I won't be able to use the terminal for a few minutes and the process can't be interrupted. R has to be forcefully terminated.
> assay(fibroSCE, "merged") <- altExps(fibroSCE) # Intended to write altExp(fibroSCE, "merged")
Error in `assays<-`(`*tmp*`, withDimnames = withDimnames, ..., value = `*vtmp*`) :
please use 'assay(x, withDimnames=FALSE)) <- value' or 'assays(x,
It is doing something, but not clear what.
PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND
2605798 dario 20 0 99.7g 83.7g 153432 R 100.0 11.1 160:09.35 rsession
In case it helps, I was trying to move something from main experiment to assay section, to make it useful for plotting.
reducedDimNames(2): PCA UMAP
mainExpName: merged
altExpNames(2): RNA SCT
I notice a few times that if I make a mistake, the error message will be printed immediately but I won't be able to use the terminal for a few minutes and the process can't be interrupted. R has to be forcefully terminated.
It is doing something, but not clear what.
In case it helps, I was trying to move something from main experiment to assay section, to make it useful for plotting.