GitHub - dennysjmarquez/MemoryBioRAG: Biomimetic cognitive memory system for AI agents, brain-inspired persistence with synaptic plasticity, hybrid PPMI+SVD vector search, LTP/LTD, and inter-agent shared cortex. Pure Python + SQLite, zero heavy dependencies.

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MemoryBioRAG

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Biomimetic cognitive memory system for AI agents, brain-inspired persistence with synaptic plasticity, hybrid PPMI+SVD vector search, LTP/LTD, and inter-agent shared cortex. Pure Python + SQLite, zero heavy dependencies.

dennysjmarquez.dev/

ai-agents biomimetics cognitive-architecture knowledge-graph long-term-memory memory-system no-llm pmi python3 rag semantic-search sqlite3 svd synaptic-plasticity vector-database

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Apache-2.0 license

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Name		Name	Last commit message	Last commit date
.github/workflows		.github/workflows
.kilo		.kilo
.venv		.venv
MemoryBioRAG_Data		MemoryBioRAG_Data
base de datos semanticas INFO		base de datos semanticas INFO
config		config
core		core
dashboard-neuro-visor		dashboard-neuro-visor
db		db
docs		docs
middleware		middleware
plugin		plugin
scratch		scratch
scripts		scripts
sessions		sessions
skills/biorag-sync		skills/biorag-sync
snapshots		snapshots
specs		specs
tests		tests
.env.example		.env.example
.gitignore		.gitignore
AGENTS.md		AGENTS.md
Building Human-Like Persistent Memory.md		Building Human-Like Persistent Memory.md
CHANGELOG.md		CHANGELOG.md
CONSTITUTION.md		CONSTITUTION.md
EXPERIMENTS.md		EXPERIMENTS.md
INFORME_COMPARATIVO.md		INFORME_COMPARATIVO.md
LICENSE		LICENSE
README.md		README.md
README_SESION_v28.1.md		README_SESION_v28.1.md
VERSION		VERSION
auto_save_plugin.py		auto_save_plugin.py
baseline_oficial_20260826.txt		baseline_oficial_20260826.txt
benchmark.py		benchmark.py
benchmark_abismo_lexico.py		benchmark_abismo_lexico.py
benchmark_abismo_lexico_report.md		benchmark_abismo_lexico_report.md
benchmark_abismo_lexico_results.json		benchmark_abismo_lexico_results.json
benchmark_comparativo.py		benchmark_comparativo.py
benchmark_comparativo_report.md		benchmark_comparativo_report.md
benchmark_comparativo_results.json		benchmark_comparativo_results.json
benchmark_results.json		benchmark_results.json
biorag.py		biorag.py
db_architecture_export.txt		db_architecture_export.txt
graph_maintenance_daemon.py		graph_maintenance_daemon.py
install.py		install.py
legacy_hubs_para_convertir.json		legacy_hubs_para_convertir.json
mcp_server.py		mcp_server.py
memory_biorag.db		memory_biorag.db
post_qa_oficial_20260917.txt		post_qa_oficial_20260917.txt
post_qa_oficial_fix_20260917.txt		post_qa_oficial_fix_20260917.txt
probar_cerebro_vivo.py		probar_cerebro_vivo.py
prototipo_clasificacion.py		prototipo_clasificacion.py
pyproject.toml		pyproject.toml
requirements.txt		requirements.txt
scratch_query.py		scratch_query.py
session-ses_fbd1.md		session-ses_fbd1.md
sleep_cycle.py		sleep_cycle.py
temp_tag.db-wal		temp_tag.db-wal
test_memory.py		test_memory.py
test_resonancia.py		test_resonancia.py
test_resonancia_avanzado.py		test_resonancia_avanzado.py
vocabulario_inicial.json		vocabulario_inicial.json