When running the pipeline with big panels or with lots of samples there are issues regarding memory and runtime that we could solve quite easily. - [ ] > 100 samples - [ ] Depths PDFs - [ ] Concat profiles clustermap/heatmap - [ ] Big panels / Exome - [ ] Compute adjusted mutation density - [ ] Plot saturation within gene (too much memory and too many plots...) - [ ] Plot saturation proportions (too many genes to fit in a single plot) - [ ] Single gene and/or sample Make sure that the pipeline also works in this scenarios
When running the pipeline with big panels or with lots of samples there are issues regarding memory and runtime that we could solve quite easily.
Make sure that the pipeline also works in this scenarios