Hello, professor ,
I want to download 1000g2015aug hg38 version .
I check the source code :
'''
if dbs=="1000g2015aug":
file_name="ALL.sites.2015_08" # hg19_ALL.sites.2015_08.txt
'''
So I use annovar to download the database as the below command :
perl ./annovar/annotate_variation.pl -downdb -webfrom annovar --buildver hg38 ALL.sites.2015_08 annodb/
But it's failed and the error message as the next :
WARNING: cannot retrieve remote files automatically (by 'wget' command or by standard Net::FTP/LWP::UserAgent Perl module).
http://www.openbioinformatics.org/annovar/download/hg38_ALL.sites.2015_08.txt.gz
http://www.openbioinformatics.org/annovar/download/hg38_ALL.sites.2015_08.txt.idx.gz
So what should I do ? thank you !
Expecting for your reply ！
Hello, professor ,
I want to download 1000g2015aug hg38 version .
I check the source code :
'''
if dbs=="1000g2015aug":
file_name="ALL.sites.2015_08" # hg19_ALL.sites.2015_08.txt
'''
So I use annovar to download the database as the below command :
perl ./annovar/annotate_variation.pl -downdb -webfrom annovar --buildver hg38 ALL.sites.2015_08 annodb/
But it's failed and the error message as the next :
WARNING: cannot retrieve remote files automatically (by 'wget' command or by standard Net::FTP/LWP::UserAgent Perl module).
http://www.openbioinformatics.org/annovar/download/hg38_ALL.sites.2015_08.txt.gz
http://www.openbioinformatics.org/annovar/download/hg38_ALL.sites.2015_08.txt.idx.gz
So what should I do ? thank you !
Expecting for your reply ！