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@NCI-GDC

Genomic Data Commons

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  1. gdc-workflow-overview gdc-workflow-overview Public

    Overview of GDC Harmonization Workflows

    43 11

  2. gdc-client gdc-client Public

    GDC Data Transfer Tool

    Python 158 44

  3. gdcdatamodel gdcdatamodel Public archive

    Translation layer between the GDC Data Dictionary and psqlgraph

    Python 28 3

  4. gdcdictionary gdcdictionary Public

    Data dictionary for the GDC

    Python 57 37

  5. psqlgraph psqlgraph Public

    Library for graph-like storage in postgresql using sqlalchemy

    Python 24 8

Repositories

Showing 10 of 91 repositories
  • gdc-frontend-framework Public
    NCI-GDC/gdc-frontend-framework's past year of commit activity
    TypeScript 14 Apache-2.0 0 0 4 Updated Sep 25, 2026
  • gdc-dnaseq-cwl Public

    CWL for GDC DNASeq workflows

    NCI-GDC/gdc-dnaseq-cwl's past year of commit activity
    Common Workflow Language 24 Apache-2.0 14 0 4 Updated Sep 25, 2026
  • json-to-sqlite Public
    NCI-GDC/json-to-sqlite's past year of commit activity
    Python 0 Apache-2.0 1 0 1 Updated Sep 25, 2026
  • fastq_cleaner Public

    FASTQ Vendor Failed Reads Removal

    NCI-GDC/fastq_cleaner's past year of commit activity
    C++ 0 Apache-2.0 0 1 1 Updated Sep 24, 2026
  • gdc-client Public

    GDC Data Transfer Tool

    NCI-GDC/gdc-client's past year of commit activity
    Python 158 Apache-2.0 44 19 30 Updated Sep 23, 2026
  • gdc-docs Public Forked from NCIP/gdc-docs

    Official repository for GDC User Guides in Markdown format

    NCI-GDC/gdc-docs's past year of commit activity
    JavaScript 63 Apache-2.0 45 0 17 Updated Sep 22, 2026
  • gdcdictionary Public

    Data dictionary for the GDC

    NCI-GDC/gdcdictionary's past year of commit activity
    Python 57 Apache-2.0 37 4 2 Updated Sep 18, 2026
  • gdcdatamodel2 Public
    NCI-GDC/gdcdatamodel2's past year of commit activity
    Python 0 Apache-2.0 2 0 4 Updated Sep 18, 2026
  • gdc-models Public

    Git repository centrally stores and serves GDC data models defined in static YAML files

    NCI-GDC/gdc-models's past year of commit activity
    Python 3 3 4 2 Updated Aug 28, 2026
  • gdc-mirnaseq-cwl Public

    CWL workflows and tools for the miRNA-Seq workflow

    NCI-GDC/gdc-mirnaseq-cwl's past year of commit activity
    Common Workflow Language 2 Apache-2.0 1 0 0 Updated Aug 28, 2026
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