Name		Name	Last commit message	Last commit date
R		R
docs		docs
inst/extdata		inst/extdata
man		man
tests		tests
vignettes		vignettes
.Rbuildignore		.Rbuildignore
.gitignore		.gitignore
DESCRIPTION		DESCRIPTION
LICENSE		LICENSE
NAMESPACE		NAMESPACE
NEWS		NEWS
README.md		README.md
chiptsne2.Rproj		chiptsne2.Rproj
demo_IK.R		demo_IK.R
dev_expressions.R		dev_expressions.R
dev_signal_heatmap.R		dev_signal_heatmap.R

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Installation

devtools::install_github("FrietzeLabUVM/chiptsne2")

How to use

Follow the use-case vignette to learn how to use chiptsne2.

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General ChIPseq and epigenetic-seq workflow R package with support for t-SNE and UMAP to discover combinatorial epigenetic patterns.

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