Skip to content

Two xref registries link to a dead host or the wrong registry #263

Description

@realmarcin

Found in the review of #261, which derives the site's link templates from the schema's prefix block.

Two registries need attention that the fix in #261 does not give them.

  • lincs.smallmolecule expands exactly as Bioregistry records it and the host is dead: it answers nothing at all. 288 pages carry a link to it. Not this repository's error, but a dead link is a dead link; either drop it from the site's resolved set or find the successor host.
  • glygen expands to GlyTouCan's URL, again as Bioregistry records it. The link resolves to the right glycan, but it is the wrong registry's page. Three pages.

Also worth knowing: no test can check that an expansion resolves, since the suite is offline. #261 verified each host once by hand and encoded the file suffixes four of them need, but a future expansion edit is the single-line change none of the tests catches. A periodic link check, outside the gate, is the honest tool for that.

Severity

P3.

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions