Issues

• Develop Conda environment for Terminator computer

  enhancement
  MunskyGroup/FISH_Processing#19 · Filter by author dmitrisvetlov opened on Oct 22, 2024
  3

  

• Refactor pipeline step, prepipline step and postpipeline steps to better names

  good first issuehelp wanted
  MunskyGroup/FISH_Processing#17 · Filter by author Formanj-0 opened on Sep 12, 2024
  1

• Seperate Steps into seperate .py files

  good first issue
  MunskyGroup/FISH_Processing#16 · Filter by author Formanj-0 opened on Sep 12, 2024
  

• Build Cell property extraction step

  enhancement
  MunskyGroup/FISH_Processing#15 · Filter by author Formanj-0 opened on Sep 12, 2024
  

• Build Parameter testing Steps

  enhancement
  MunskyGroup/FISH_Processing#14 · Filter by author Formanj-0 opened on Sep 12, 2024

• Send Multiple Pipeline folders of the same data

  enhancementFuture Issue
  MunskyGroup/FISH_Processing#13 · Filter by author Formanj-0 opened on Sep 12, 2024

• Rework Step Class

  enhancementFuture Issue
  MunskyGroup/FISH_Processing#12 · Filter by author Formanj-0 opened on Sep 12, 2024
  1

  

• Build parallel Pipeline

  enhancement
  MunskyGroup/FISH_Processing#11 · Filter by author Formanj-0 opened on Sep 12, 2024
  

• Create Spot Simulations

  enhancement
  MunskyGroup/FISH_Processing#10 · Filter by author Formanj-0 opened on Sep 12, 2024

• Build systematic testing of individual steps

  enhancement
  MunskyGroup/FISH_Processing#9 · Filter by author Formanj-0 opened on Sep 12, 2024

• Build test

  enhancement
  MunskyGroup/FISH_Processing#8 · Filter by author Formanj-0 opened on Sep 12, 2024
  

• Build examples folder

  documentationgood first issue
  MunskyGroup/FISH_Processing#6 · Filter by author Formanj-0 opened on Sep 12, 2024
  

• Build a table of pipeline step parameters

  documentationenhancement
  MunskyGroup/FISH_Processing#5 · Filter by author Formanj-0 opened on Sep 12, 2024
  

• BigFISH Spot Decomposition mixup

  MunskyGroup/FISH_Processing#4 · Filter by author ericron opened on Aug 21, 2024
  1

• Nonetype error occuring in second image

  MunskyGroup/FISH_Processing#2 · Filter by author Formanj-0 opened on Jun 19, 2024
  1

• where is config.yml

  MunskyGroup/FISH_Processing#1 · Filter by author saramoein372 opened on Apr 24, 2024