From 41cd92c613b83baf854e2485b0e0219db2e77996 Mon Sep 17 00:00:00 2001
From: "Donal K. Fellows" <donal.k.fellows@manchester.ac.uk>
Date: Wed, 5 Aug 2026 11:04:56 +0100
Subject: [PATCH] Update the pyproject.toml

Fixes a whole bunch of minor issues
Drops support for Python 3.8, 3.9, and 3.10; dependency changes force this.
---
 .github/workflows/test.yml |    2 +-
 poetry.lock                | 3949 +++++++-----------------------------
 pyproject.toml             |   61 +-
 3 files changed, 796 insertions(+), 3216 deletions(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index 445ec9e..3caf670 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -13,7 +13,7 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        python-version: ["3.10"]
+        python-version: ["3.12"]
         os: [ubuntu-latest, windows-latest, macos-latest]
 
     runs-on: ${{ matrix.os }}
diff --git a/poetry.lock b/poetry.lock
index 95df795..cb4a075 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,17 +1,4 @@
-# This file is automatically @generated by Poetry 2.1.3 and should not be changed by hand.
-
-[[package]]
-name = "aiohappyeyeballs"
-version = "2.4.4"
-description = "Happy Eyeballs for asyncio"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "aiohappyeyeballs-2.4.4-py3-none-any.whl", hash = "sha256:a980909d50efcd44795c4afeca523296716d50cd756ddca6af8c65b996e27de8"},
-    {file = "aiohappyeyeballs-2.4.4.tar.gz", hash = "sha256:5fdd7d87889c63183afc18ce9271f9b0a7d32c2303e394468dd45d514a757745"},
-]
+# This file is automatically @generated by Poetry 2.4.1 and should not be changed by hand.
 
 [[package]]
 name = "aiohappyeyeballs"
@@ -20,126 +7,11 @@ description = "Happy Eyeballs for asyncio"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "aiohappyeyeballs-2.6.1-py3-none-any.whl", hash = "sha256:f349ba8f4b75cb25c99c5c2d84e997e485204d2902a9597802b0371f09331fb8"},
     {file = "aiohappyeyeballs-2.6.1.tar.gz", hash = "sha256:c3f9d0113123803ccadfdf3f0faa505bc78e6a72d1cc4806cbd719826e943558"},
 ]
 
-[[package]]
-name = "aiohttp"
-version = "3.10.11"
-description = "Async http client/server framework (asyncio)"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
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-    {file = "aiohttp-3.10.11-cp39-cp39-win32.whl", hash = "sha256:22b7c540c55909140f63ab4f54ec2c20d2635c0289cdd8006da46f3327f971b9"},
-    {file = "aiohttp-3.10.11-cp39-cp39-win_amd64.whl", hash = "sha256:7b26b1551e481012575dab8e3727b16fe7dd27eb2711d2e63ced7368756268fb"},
-    {file = "aiohttp-3.10.11.tar.gz", hash = "sha256:9dc2b8f3dcab2e39e0fa309c8da50c3b55e6f34ab25f1a71d3288f24924d33a7"},
-]
-
-[package.dependencies]
-aiohappyeyeballs = ">=2.3.0"
-aiosignal = ">=1.1.2"
-async-timeout = {version = ">=4.0,<6.0", markers = "python_version < \"3.11\""}
-attrs = ">=17.3.0"
-frozenlist = ">=1.1.1"
-multidict = ">=4.5,<7.0"
-yarl = ">=1.12.0,<2.0"
-
-[package.extras]
-speedups = ["Brotli ; platform_python_implementation == \"CPython\"", "aiodns (>=3.2.0) ; sys_platform == \"linux\" or sys_platform == \"darwin\"", "brotlicffi ; platform_python_implementation != \"CPython\""]
-
 [[package]]
 name = "aiohttp"
 version = "3.12.15"
@@ -147,7 +19,6 @@ description = "Async http client/server framework (asyncio)"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "aiohttp-3.12.15-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:b6fc902bff74d9b1879ad55f5404153e2b33a82e72a95c89cec5eb6cc9e92fbc"},
     {file = "aiohttp-3.12.15-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:098e92835b8119b54c693f2f88a1dec690e20798ca5f5fe5f0520245253ee0af"},
@@ -240,7 +111,6 @@ files = [
 [package.dependencies]
 aiohappyeyeballs = ">=2.5.0"
 aiosignal = ">=1.4.0"
-async-timeout = {version = ">=4.0,<6.0", markers = "python_version < \"3.11\""}
 attrs = ">=17.3.0"
 frozenlist = ">=1.1.1"
 multidict = ">=4.5,<7.0"
@@ -250,22 +120,6 @@ yarl = ">=1.17.0,<2.0"
 [package.extras]
 speedups = ["Brotli ; platform_python_implementation == \"CPython\"", "aiodns (>=3.3.0)", "brotlicffi ; platform_python_implementation != \"CPython\""]
 
-[[package]]
-name = "aiosignal"
-version = "1.3.1"
-description = "aiosignal: a list of registered asynchronous callbacks"
-optional = false
-python-versions = ">=3.7"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "aiosignal-1.3.1-py3-none-any.whl", hash = "sha256:f8376fb07dd1e86a584e4fcdec80b36b7f81aac666ebc724e2c090300dd83b17"},
-    {file = "aiosignal-1.3.1.tar.gz", hash = "sha256:54cd96e15e1649b75d6c87526a6ff0b6c1b0dd3459f43d9ca11d48c339b68cfc"},
-]
-
-[package.dependencies]
-frozenlist = ">=1.1.0"
-
 [[package]]
 name = "aiosignal"
 version = "1.4.0"
@@ -273,7 +127,6 @@ description = "aiosignal: a list of registered asynchronous callbacks"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "aiosignal-1.4.0-py3-none-any.whl", hash = "sha256:053243f8b92b990551949e63930a839ff0cf0b0ebbe0597b0f3fb19e1a0fe82e"},
     {file = "aiosignal-1.4.0.tar.gz", hash = "sha256:f47eecd9468083c2029cc99945502cb7708b082c232f9aca65da147157b251c7"},
@@ -283,19 +136,6 @@ files = [
 frozenlist = ">=1.1.0"
 typing-extensions = {version = ">=4.2", markers = "python_version < \"3.13\""}
 
-[[package]]
-name = "alabaster"
-version = "0.7.13"
-description = "A configurable sidebar-enabled Sphinx theme"
-optional = false
-python-versions = ">=3.6"
-groups = ["dev"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "alabaster-0.7.13-py3-none-any.whl", hash = "sha256:1ee19aca801bbabb5ba3f5f258e4422dfa86f82f3e9cefb0859b283cdd7f62a3"},
-    {file = "alabaster-0.7.13.tar.gz", hash = "sha256:a27a4a084d5e690e16e01e03ad2b2e552c61a65469419b907243193de1a84ae2"},
-]
-
 [[package]]
 name = "alabaster"
 version = "0.7.16"
@@ -303,36 +143,11 @@ description = "A light, configurable Sphinx theme"
 optional = false
 python-versions = ">=3.9"
 groups = ["dev"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "alabaster-0.7.16-py3-none-any.whl", hash = "sha256:b46733c07dce03ae4e150330b975c75737fa60f0a7c591b6c8bf4928a28e2c92"},
     {file = "alabaster-0.7.16.tar.gz", hash = "sha256:75a8b99c28a5dad50dd7f8ccdd447a121ddb3892da9e53d1ca5cca3106d58d65"},
 ]
 
-[[package]]
-name = "anyio"
-version = "4.5.2"
-description = "High level compatibility layer for multiple asynchronous event loop implementations"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "anyio-4.5.2-py3-none-any.whl", hash = "sha256:c011ee36bc1e8ba40e5a81cb9df91925c218fe9b778554e0b56a21e1b5d4716f"},
-    {file = "anyio-4.5.2.tar.gz", hash = "sha256:23009af4ed04ce05991845451e11ef02fc7c5ed29179ac9a420e5ad0ac7ddc5b"},
-]
-
-[package.dependencies]
-exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""}
-idna = ">=2.8"
-sniffio = ">=1.1"
-typing-extensions = {version = ">=4.1", markers = "python_version < \"3.11\""}
-
-[package.extras]
-doc = ["Sphinx (>=7.4,<8.0)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme"]
-test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "truststore (>=0.9.1) ; python_version >= \"3.10\"", "uvloop (>=0.21.0b1) ; platform_python_implementation == \"CPython\" and platform_system != \"Windows\""]
-trio = ["trio (>=0.26.1)"]
-
 [[package]]
 name = "anyio"
 version = "4.10.0"
@@ -340,14 +155,12 @@ description = "High-level concurrency and networking framework on top of asyncio
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "anyio-4.10.0-py3-none-any.whl", hash = "sha256:60e474ac86736bbfd6f210f7a61218939c318f43f9972497381f1c5e930ed3d1"},
     {file = "anyio-4.10.0.tar.gz", hash = "sha256:3f3fae35c96039744587aa5b8371e7e8e603c0702999535961dd336026973ba6"},
 ]
 
 [package.dependencies]
-exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""}
 idna = ">=2.8"
 sniffio = ">=1.1"
 typing_extensions = {version = ">=4.5", markers = "python_version < \"3.13\""}
@@ -362,7 +175,7 @@ description = "Disable App Nap on macOS >= 10.9"
 optional = false
 python-versions = ">=3.6"
 groups = ["main", "dev"]
-markers = "platform_system == \"Darwin\" or sys_platform == \"darwin\" and python_version < \"3.10\""
+markers = "platform_system == \"Darwin\""
 files = [
     {file = "appnope-0.1.4-py2.py3-none-any.whl", hash = "sha256:502575ee11cd7a28c0205f379b525beefebab9d161b7c964670864014ed7213c"},
     {file = "appnope-0.1.4.tar.gz", hash = "sha256:1de3860566df9caf38f01f86f65e0e13e379af54f9e4bee1e66b48f2efffd1ee"},
@@ -399,45 +212,6 @@ files = [
 [package.dependencies]
 argon2-cffi-bindings = "*"
 
-[[package]]
-name = "argon2-cffi-bindings"
-version = "21.2.0"
-description = "Low-level CFFI bindings for Argon2"
-optional = false
-python-versions = ">=3.6"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "argon2-cffi-bindings-21.2.0.tar.gz", hash = "sha256:bb89ceffa6c791807d1305ceb77dbfacc5aa499891d2c55661c6459651fc39e3"},
-    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-macosx_10_9_x86_64.whl", hash = "sha256:ccb949252cb2ab3a08c02024acb77cfb179492d5701c7cbdbfd776124d4d2367"},
-    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:9524464572e12979364b7d600abf96181d3541da11e23ddf565a32e70bd4dc0d"},
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-    {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:d4966ef5848d820776f5f562a7d45fdd70c2f330c961d0d745b784034bd9f48d"},
-    {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:20ef543a89dee4db46a1a6e206cd015360e5a75822f76df533845c3cbaf72670"},
-    {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:ed2937d286e2ad0cc79a7087d3c272832865f779430e0cc2b4f3718d3159b0cb"},
-    {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-win_amd64.whl", hash = "sha256:5e00316dabdaea0b2dd82d141cc66889ced0cdcbfa599e8b471cf22c620c329a"},
-]
-
-[package.dependencies]
-cffi = ">=1.0.1"
-
-[package.extras]
-dev = ["cogapp", "pre-commit", "pytest", "wheel"]
-tests = ["pytest"]
-
 [[package]]
 name = "argon2-cffi-bindings"
 version = "25.1.0"
@@ -445,7 +219,6 @@ description = "Low-level CFFI bindings for Argon2"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "argon2_cffi_bindings-25.1.0-cp314-cp314t-macosx_10_13_universal2.whl", hash = "sha256:3d3f05610594151994ca9ccb3c771115bdb4daef161976a266f0dd8aa9996b8f"},
     {file = "argon2_cffi_bindings-25.1.0-cp314-cp314t-macosx_10_13_x86_64.whl", hash = "sha256:8b8efee945193e667a396cbc7b4fb7d357297d6234d30a489905d96caabde56b"},
@@ -476,7 +249,10 @@ files = [
 ]
 
 [package.dependencies]
-cffi = {version = ">=1.0.1", markers = "python_version < \"3.14\""}
+cffi = [
+    {version = ">=1.0.1", markers = "python_version < \"3.14\""},
+    {version = ">=2.0.0b1", markers = "python_version >= \"3.14\""},
+]
 
 [[package]]
 name = "arrow"
@@ -523,8 +299,7 @@ files = [
 
 [package.dependencies]
 lazy-object-proxy = ">=1.4.0"
-typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""}
-wrapt = {version = ">=1.11,<2", markers = "python_version < \"3.11\""}
+wrapt = {version = ">=1.14,<2", markers = "python_version >= \"3.11\""}
 
 [[package]]
 name = "asttokens"
@@ -542,18 +317,6 @@ files = [
 astroid = ["astroid (>=2,<4)"]
 test = ["astroid (>=2,<4)", "pytest", "pytest-cov", "pytest-xdist"]
 
-[[package]]
-name = "async-timeout"
-version = "5.0.1"
-description = "Timeout context manager for asyncio programs"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-files = [
-    {file = "async_timeout-5.0.1-py3-none-any.whl", hash = "sha256:39e3809566ff85354557ec2398b55e096c8364bacac9405a7a1fa429e77fe76c"},
-    {file = "async_timeout-5.0.1.tar.gz", hash = "sha256:d9321a7a3d5a6a5e187e824d2fa0793ce379a202935782d555d6e9d2735677d3"},
-]
-
 [[package]]
 name = "atomicwrites"
 version = "1.4.1"
@@ -586,6 +349,22 @@ docs = ["cogapp", "furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphi
 tests = ["cloudpickle ; platform_python_implementation == \"CPython\"", "hypothesis", "mypy (>=1.11.1) ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pytest-xdist[psutil]"]
 tests-mypy = ["mypy (>=1.11.1) ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\"", "pytest-mypy-plugins ; platform_python_implementation == \"CPython\" and python_version >= \"3.10\""]
 
+[[package]]
+name = "autopep8"
+version = "2.3.2"
+description = "A tool that automatically formats Python code to conform to the PEP 8 style guide"
+optional = true
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "extra == \"matflow\""
+files = [
+    {file = "autopep8-2.3.2-py2.py3-none-any.whl", hash = "sha256:ce8ad498672c845a0c3de2629c15b635ec2b05ef8177a6e7c91c74f3e9b51128"},
+    {file = "autopep8-2.3.2.tar.gz", hash = "sha256:89440a4f969197b69a995e4ce0661b031f455a9f776d2c5ba3dbd83466931758"},
+]
+
+[package.dependencies]
+pycodestyle = ">=2.12.0"
+
 [[package]]
 name = "babel"
 version = "2.17.0"
@@ -598,25 +377,9 @@ files = [
     {file = "babel-2.17.0.tar.gz", hash = "sha256:0c54cffb19f690cdcc52a3b50bcbf71e07a808d1c80d549f2459b9d2cf0afb9d"},
 ]
 
-[package.dependencies]
-pytz = {version = ">=2015.7", markers = "python_version < \"3.9\""}
-
 [package.extras]
 dev = ["backports.zoneinfo ; python_version < \"3.9\"", "freezegun (>=1.0,<2.0)", "jinja2 (>=3.0)", "pytest (>=6.0)", "pytest-cov", "pytz", "setuptools", "tzdata ; sys_platform == \"win32\""]
 
-[[package]]
-name = "backcall"
-version = "0.2.0"
-description = "Specifications for callback functions passed in to an API"
-optional = false
-python-versions = "*"
-groups = ["main", "dev"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "backcall-0.2.0-py2.py3-none-any.whl", hash = "sha256:fbbce6a29f263178a1f7915c1940bde0ec2b2a967566fe1c65c1dfb7422bd255"},
-    {file = "backcall-0.2.0.tar.gz", hash = "sha256:5cbdbf27be5e7cfadb448baf0aa95508f91f2bbc6c6437cd9cd06e2a4c215e1e"},
-]
-
 [[package]]
 name = "beautifulsoup4"
 version = "4.13.4"
@@ -640,13 +403,33 @@ charset-normalizer = ["charset-normalizer"]
 html5lib = ["html5lib"]
 lxml = ["lxml"]
 
+[[package]]
+name = "beautifultable"
+version = "1.1.0"
+description = "Print text tables for terminals"
+optional = true
+python-versions = "*"
+groups = ["main"]
+markers = "extra == \"matflow\""
+files = [
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+    {file = "beautifultable-1.1.0.tar.gz", hash = "sha256:040bc987444965678f4ffdfa2f17ac357f1a13e5875b161c9a1899b375319d17"},
+]
+
+[package.dependencies]
+wcwidth = "*"
+
+[package.extras]
+all = ["pandas"]
+dev = ["pandas"]
+
 [[package]]
 name = "black"
 version = "22.12.0"
 description = "The uncompromising code formatter."
 optional = false
 python-versions = ">=3.7"
-groups = ["dev"]
+groups = ["main", "dev"]
 files = [
     {file = "black-22.12.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:9eedd20838bd5d75b80c9f5487dbcb06836a43833a37846cf1d8c1cc01cef59d"},
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@@ -661,14 +444,13 @@ files = [
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     {file = "black-22.12.0.tar.gz", hash = "sha256:229351e5a18ca30f447bf724d007f890f97e13af070bb6ad4c0a441cd7596a2f"},
 ]
+markers = {main = "extra == \"matflow\""}
 
 [package.dependencies]
 click = ">=8.0.0"
 mypy-extensions = ">=0.4.3"
 pathspec = ">=0.9.0"
 platformdirs = ">=2"
-tomli = {version = ">=1.1.0", markers = "python_full_version < \"3.11.0a7\""}
-typing-extensions = {version = ">=3.10.0.0", markers = "python_version < \"3.10\""}
 
 [package.extras]
 colorama = ["colorama (>=0.4.3)"]
@@ -676,27 +458,6 @@ d = ["aiohttp (>=3.7.4)"]
 jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"]
 uvloop = ["uvloop (>=0.15.2)"]
 
-[[package]]
-name = "bleach"
-version = "6.1.0"
-description = "An easy safelist-based HTML-sanitizing tool."
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
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-    {file = "bleach-6.1.0.tar.gz", hash = "sha256:0a31f1837963c41d46bbf1331b8778e1308ea0791db03cc4e7357b97cf42a8fe"},
-]
-
-[package.dependencies]
-six = ">=1.9.0"
-tinycss2 = {version = ">=1.1.0,<1.3", optional = true, markers = "extra == \"css\""}
-webencodings = "*"
-
-[package.extras]
-css = ["tinycss2 (>=1.1.0,<1.3)"]
-
 [[package]]
 name = "bleach"
 version = "6.2.0"
@@ -704,7 +465,6 @@ description = "An easy safelist-based HTML-sanitizing tool."
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -805,11 +565,125 @@ files = [
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     {file = "cffi-1.17.1.tar.gz", hash = "sha256:1c39c6016c32bc48dd54561950ebd6836e1670f2ae46128f67cf49e789c52824"},
 ]
-markers = {dev = "implementation_name == \"pypy\""}
+markers = {main = "python_version <= \"3.13\"", dev = "python_version <= \"3.13\" and implementation_name == \"pypy\""}
 
 [package.dependencies]
 pycparser = "*"
 
+[[package]]
+name = "cffi"
+version = "2.1.1"
+description = "Foreign Function Interface for Python calling C code."
+optional = false
+python-versions = ">=3.10"
+groups = ["main", "dev"]
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-]
-
-[package.dependencies]
-numpy = {version = ">=1.16,<2.0", markers = "python_version <= \"3.11\""}
-
-[package.extras]
-bokeh = ["bokeh", "selenium"]
-docs = ["furo", "sphinx (>=7.2)", "sphinx-copybutton"]
-mypy = ["contourpy[bokeh,docs]", "docutils-stubs", "mypy (==1.4.1)", "types-Pillow"]
-test = ["Pillow", "contourpy[test-no-images]", "matplotlib"]
-test-no-images = ["pytest", "pytest-cov", "wurlitzer"]
-
 [[package]]
 name = "contourpy"
 version = "1.3.2"
@@ -1042,7 +827,6 @@ description = "Python library for calculating contours of 2D quadrilateral grids
 optional = false
 python-versions = ">=3.10"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -1212,29 +996,30 @@ files = [
 
 [[package]]
 name = "defdap"
-version = "0.93.6"
+version = "1.2.1"
 description = "A python library for correlating EBSD and HRDIC data."
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.8"
 groups = ["main"]
 files = [
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+    {file = "defdap-1.2.1-py3-none-any.whl", hash = "sha256:4ba979d78831b83db802326c578379aa0d70066adda4560bee384720b92a9a6f"},
+    {file = "defdap-1.2.1.tar.gz", hash = "sha256:9fb7b4ddc7580cfed5fc74894a502974e8c74dfc8a4dffc5e47a0edf80f47dc8"},
 ]
 
 [package.dependencies]
 matplotlib = ">=3.0.0"
-matplotlib-scalebar = "*"
+matplotlib_scalebar = "*"
 networkx = "*"
+numba = "*"
 numpy = "*"
 pandas = "*"
 peakutils = "*"
-scikit-image = "*"
-scipy = "*"
+scikit-image = ">=0.19"
+scipy = ">=1.9"
 
 [package.extras]
-docs = ["ipykernel", "ipympl", "nbsphinx (==0.9.3)", "pandoc", "sphinx (==5.0.2)", "sphinx-autodoc-typehints (==1.11.1)", "sphinx-rtd-theme (==0.5.0)"]
-testing = ["coverage", "pytest", "pytest-cases", "pytest-cov"]
+docs = ["ipykernel", "ipympl", "nbsphinx (==0.9.3)", "pandoc", "sphinx (==5.0.2)", "sphinx_autodoc_typehints (==1.11.1)", "sphinx_rtd_theme (==0.5.0)"]
+testing = ["coverage", "pytest (<8)", "pytest-cov", "pytest_cases"]
 
 [[package]]
 name = "defusedxml"
@@ -1288,6 +1073,24 @@ files = [
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 ]
 
+[[package]]
+name = "dropbox"
+version = "10.1.2"
+description = "Official Dropbox API Client"
+optional = true
+python-versions = "*"
+groups = ["main"]
+markers = "extra == \"matflow\""
+files = [
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+]
+
+[package.dependencies]
+requests = ">=2.16.2"
+six = ">=1.12.0"
+
 [[package]]
 name = "entrypoints"
 version = "0.4"
@@ -1300,25 +1103,6 @@ files = [
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-version = "1.3.0"
-description = "Backport of PEP 654 (exception groups)"
-optional = false
-python-versions = ">=3.7"
-groups = ["main", "dev"]
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-
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-
-[package.extras]
-test = ["pytest (>=6)"]
-
 [[package]]
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 version = "2.2.0"
@@ -1341,7 +1125,7 @@ description = "A python package that provides useful locks"
 optional = false
 python-versions = ">=3.6"
 groups = ["main"]
-markers = "sys_platform != \"emscripten\" or python_version < \"3.10\""
+markers = "sys_platform != \"emscripten\""
 files = [
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@@ -1362,24 +1146,6 @@ files = [
 [package.extras]
 devel = ["colorama", "json-spec", "jsonschema", "pylint", "pytest", "pytest-benchmark", "pytest-cache", "validictory"]
 
-[[package]]
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-description = "A platform independent file lock."
-optional = false
-python-versions = ">=3.8"
-groups = ["dev"]
-markers = "python_version < \"3.10\""
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-typing = ["typing-extensions (>=4.12.2) ; python_version < \"3.11\""]
-
 [[package]]
 name = "filelock"
 version = "3.18.0"
@@ -1387,7 +1153,6 @@ description = "A platform independent file lock."
 optional = false
 python-versions = ">=3.9"
 groups = ["dev"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -1398,81 +1163,6 @@ docs = ["furo (>=2024.8.6)", "sphinx (>=8.1.3)", "sphinx-autodoc-typehints (>=3)
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 typing = ["typing-extensions (>=4.12.2) ; python_version < \"3.11\""]
 
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-description = "Tools to manipulate font files"
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-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
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+    {file = "greenlet-3.5.4.tar.gz", hash = "sha256:0232ae1de90a8e07867bb127d7a6ba2301e859145489f25cda8a6096dabe1d20"},
+]
+
+[package.extras]
+docs = ["Sphinx", "furo"]
+test = ["objgraph", "psutil", "setuptools"]
 
 [[package]]
 name = "h5py"
@@ -1811,7 +1455,6 @@ description = "Read and write HDF5 files from Python"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "h5py-3.14.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:24df6b2622f426857bda88683b16630014588a0e4155cba44e872eb011c4eaed"},
     {file = "h5py-3.14.0-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:6ff2389961ee5872de697054dd5a033b04284afc3fb52dc51d94561ece2c10c6"},
@@ -1845,29 +1488,50 @@ files = [
 numpy = ">=1.19.3"
 
 [[package]]
-name = "identify"
-version = "2.6.1"
-description = "File identification library for Python"
-optional = false
-python-versions = ">=3.8"
-groups = ["dev"]
-markers = "python_version < \"3.10\""
+name = "hickle"
+version = "5.0.3"
+description = "Hickle - an HDF5 based version of pickle"
+optional = true
+python-versions = ">=3.7"
+groups = ["main"]
+markers = "extra == \"hickle\" or extra == \"matflow\""
 files = [
-    {file = "identify-2.6.1-py2.py3-none-any.whl", hash = "sha256:53863bcac7caf8d2ed85bd20312ea5dcfc22226800f6d6881f232d861db5a8f0"},
-    {file = "identify-2.6.1.tar.gz", hash = "sha256:91478c5fb7c3aac5ff7bf9b4344f803843dc586832d5f110d672b19aa1984c98"},
+    {file = "hickle-5.0.3-py3-none-any.whl", hash = "sha256:3b87613de35e644d94541b8c79ffced5e62332e001b4f62c53ff11bd3fa87dad"},
+    {file = "hickle-5.0.3.tar.gz", hash = "sha256:027e51ccad279d168123a244525e6c84bac0db64605b311b0bd349891be0c53e"},
 ]
 
-[package.extras]
-license = ["ukkonen"]
+[package.dependencies]
+h5py = ">=2.10.0"
+numpy = ">=1.8,<1.20 || >1.20"
 
 [[package]]
-name = "identify"
-version = "2.6.12"
-description = "File identification library for Python"
-optional = false
-python-versions = ">=3.9"
-groups = ["dev"]
-markers = "python_version == \"3.10\""
+name = "hpcflow"
+version = "0.1.16"
+description = "Generate and submit jobscripts for an automated simulate, process, archive workflow on high performance computing (HPC) systems."
+optional = true
+python-versions = "*"
+groups = ["main"]
+markers = "extra == \"matflow\""
+files = [
+    {file = "hpcflow-0.1.16-py3-none-any.whl", hash = "sha256:918635086f14db6fef7a548a803de792350d688f888a4f964bc653cc82d7c589"},
+    {file = "hpcflow-0.1.16.tar.gz", hash = "sha256:97a2f05be40d58ae5f9cfadacaa4954237ac0cd0ba3fbcdc0d309c9f58affae2"},
+]
+
+[package.dependencies]
+beautifultable = "*"
+click = ">7.0"
+dropbox = "10.1.2"
+"ruamel.yaml" = "*"
+six = ">1.11.0"
+sqlalchemy = ">=1.4.0"
+
+[[package]]
+name = "identify"
+version = "2.6.12"
+description = "File identification library for Python"
+optional = false
+python-versions = ">=3.9"
+groups = ["dev"]
 files = [
     {file = "identify-2.6.12-py2.py3-none-any.whl", hash = "sha256:ad9672d5a72e0d2ff7c5c8809b62dfa60458626352fb0eb7b55e69bdc45334a2"},
     {file = "identify-2.6.12.tar.gz", hash = "sha256:d8de45749f1efb108badef65ee8386f0f7bb19a7f26185f74de6367bffbaf0e6"},
@@ -1891,41 +1555,6 @@ files = [
 [package.extras]
 all = ["flake8 (>=7.1.1)", "mypy (>=1.11.2)", "pytest (>=8.3.2)", "ruff (>=0.6.2)"]
 
-[[package]]
-name = "imageio"
-version = "2.35.1"
-description = "Library for reading and writing a wide range of image, video, scientific, and volumetric data formats."
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "imageio-2.35.1-py3-none-any.whl", hash = "sha256:6eb2e5244e7a16b85c10b5c2fe0f7bf961b40fcb9f1a9fd1bd1d2c2f8fb3cd65"},
-    {file = "imageio-2.35.1.tar.gz", hash = "sha256:4952dfeef3c3947957f6d5dedb1f4ca31c6e509a476891062396834048aeed2a"},
-]
-
-[package.dependencies]
-numpy = "*"
-pillow = ">=8.3.2"
-
-[package.extras]
-all-plugins = ["astropy", "av", "imageio-ffmpeg", "psutil", "tifffile"]
-all-plugins-pypy = ["av", "imageio-ffmpeg", "psutil", "tifffile"]
-build = ["wheel"]
-dev = ["black", "flake8", "fsspec[github]", "pytest", "pytest-cov"]
-docs = ["numpydoc", "pydata-sphinx-theme", "sphinx (<6)"]
-ffmpeg = ["imageio-ffmpeg", "psutil"]
-fits = ["astropy"]
-full = ["astropy", "av", "black", "flake8", "fsspec[github]", "gdal", "imageio-ffmpeg", "itk", "numpy (>2)", "numpydoc", "pillow-heif", "psutil", "pydata-sphinx-theme", "pytest", "pytest-cov", "rawpy", "sphinx (<6)", "tifffile", "wheel"]
-gdal = ["gdal"]
-itk = ["itk"]
-linting = ["black", "flake8"]
-pillow-heif = ["pillow-heif"]
-pyav = ["av"]
-rawpy = ["numpy (>2)", "rawpy"]
-test = ["fsspec[github]", "pytest", "pytest-cov"]
-tifffile = ["tifffile"]
-
 [[package]]
 name = "imageio"
 version = "2.37.0"
@@ -1933,7 +1562,6 @@ description = "Library for reading and writing a wide range of image, video, sci
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "imageio-2.37.0-py3-none-any.whl", hash = "sha256:11efa15b87bc7871b61590326b2d635439acc321cf7f8ce996f812543ce10eed"},
     {file = "imageio-2.37.0.tar.gz", hash = "sha256:71b57b3669666272c818497aebba2b4c5f20d5b37c81720e5e1a56d59c492996"},
@@ -1973,55 +1601,6 @@ files = [
     {file = "imagesize-1.4.1.tar.gz", hash = "sha256:69150444affb9cb0d5cc5a92b3676f0b2fb7cd9ae39e947a5e11a36b4497cd4a"},
 ]
 
-[[package]]
-name = "importlib-metadata"
-version = "8.5.0"
-description = "Read metadata from Python packages"
-optional = false
-python-versions = ">=3.8"
-groups = ["main", "dev"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "importlib_metadata-8.5.0-py3-none-any.whl", hash = "sha256:45e54197d28b7a7f1559e60b95e7c567032b602131fbd588f1497f47880aa68b"},
-    {file = "importlib_metadata-8.5.0.tar.gz", hash = "sha256:71522656f0abace1d072b9e5481a48f07c138e00f079c38c8f883823f9c26bd7"},
-]
-
-[package.dependencies]
-zipp = ">=3.20"
-
-[package.extras]
-check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1) ; sys_platform != \"cygwin\""]
-cover = ["pytest-cov"]
-doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
-enabler = ["pytest-enabler (>=2.2)"]
-perf = ["ipython"]
-test = ["flufl.flake8", "importlib-resources (>=1.3) ; python_version < \"3.9\"", "jaraco.test (>=5.4)", "packaging", "pyfakefs", "pytest (>=6,!=8.1.*)", "pytest-perf (>=0.9.2)"]
-type = ["pytest-mypy"]
-
-[[package]]
-name = "importlib-resources"
-version = "6.4.5"
-description = "Read resources from Python packages"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "importlib_resources-6.4.5-py3-none-any.whl", hash = "sha256:ac29d5f956f01d5e4bb63102a5a19957f1b9175e45649977264a1416783bb717"},
-    {file = "importlib_resources-6.4.5.tar.gz", hash = "sha256:980862a1d16c9e147a59603677fa2aa5fd82b87f223b6cb870695bcfce830065"},
-]
-
-[package.dependencies]
-zipp = {version = ">=3.1.0", markers = "python_version < \"3.10\""}
-
-[package.extras]
-check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1) ; sys_platform != \"cygwin\""]
-cover = ["pytest-cov"]
-doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
-enabler = ["pytest-enabler (>=2.2)"]
-test = ["jaraco.test (>=5.4)", "pytest (>=6,!=8.1.*)", "zipp (>=3.17)"]
-type = ["pytest-mypy"]
-
 [[package]]
 name = "iniconfig"
 version = "2.1.0"
@@ -2089,31 +1668,6 @@ pyqt5 = ["pyqt5"]
 pyside6 = ["pyside6"]
 test = ["flaky", "ipyparallel", "pre-commit", "pytest (>=7.0)", "pytest-asyncio (>=0.23.5)", "pytest-cov", "pytest-timeout"]
 
-[[package]]
-name = "ipympl"
-version = "0.9.3"
-description = "Matplotlib Jupyter Extension"
-optional = false
-python-versions = "*"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "ipympl-0.9.3-py2.py3-none-any.whl", hash = "sha256:d113cd55891bafe9b27ef99b6dd111a87beb6bb2ae550c404292272103be8013"},
-    {file = "ipympl-0.9.3.tar.gz", hash = "sha256:49bab75c05673a6881d1aaec5d8ac81d4624f73d292d154c5fb7096f10236a2b"},
-]
-
-[package.dependencies]
-ipython = "<9"
-ipython-genutils = "*"
-ipywidgets = ">=7.6.0,<9"
-matplotlib = ">=3.4.0,<4"
-numpy = "*"
-pillow = "*"
-traitlets = "<6"
-
-[package.extras]
-docs = ["Sphinx (>=1.5)", "myst-nb", "sphinx-book-theme", "sphinx-copybutton", "sphinx-thebe", "sphinx-togglebutton"]
-
 [[package]]
 name = "ipympl"
 version = "0.9.7"
@@ -2121,7 +1675,6 @@ description = "Matplotlib Jupyter Extension"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "ipympl-0.9.7-py3-none-any.whl", hash = "sha256:3698ee7eaa0b047a7603517d7aa1b71b32118a5f51754cab45ec5d994f67208f"},
     {file = "ipympl-0.9.7.tar.gz", hash = "sha256:3e505a56b6e9a7bfc4d40c1a861a0547adb16820eb67ec79131335dd0a5084f0"},
@@ -2138,47 +1691,6 @@ traitlets = "<6"
 [package.extras]
 docs = ["myst-nb", "sphinx (>=1.5)", "sphinx-book-theme", "sphinx-copybutton", "sphinx-thebe", "sphinx-togglebutton"]
 
-[[package]]
-name = "ipython"
-version = "8.12.3"
-description = "IPython: Productive Interactive Computing"
-optional = false
-python-versions = ">=3.8"
-groups = ["main", "dev"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "ipython-8.12.3-py3-none-any.whl", hash = "sha256:b0340d46a933d27c657b211a329d0be23793c36595acf9e6ef4164bc01a1804c"},
-    {file = "ipython-8.12.3.tar.gz", hash = "sha256:3910c4b54543c2ad73d06579aa771041b7d5707b033bd488669b4cf544e3b363"},
-]
-
-[package.dependencies]
-appnope = {version = "*", markers = "sys_platform == \"darwin\""}
-backcall = "*"
-colorama = {version = "*", markers = "sys_platform == \"win32\""}
-decorator = "*"
-jedi = ">=0.16"
-matplotlib-inline = "*"
-pexpect = {version = ">4.3", markers = "sys_platform != \"win32\""}
-pickleshare = "*"
-prompt-toolkit = ">=3.0.30,<3.0.37 || >3.0.37,<3.1.0"
-pygments = ">=2.4.0"
-stack-data = "*"
-traitlets = ">=5"
-typing-extensions = {version = "*", markers = "python_version < \"3.10\""}
-
-[package.extras]
-all = ["black", "curio", "docrepr", "ipykernel", "ipyparallel", "ipywidgets", "matplotlib", "matplotlib (!=3.2.0)", "nbconvert", "nbformat", "notebook", "numpy (>=1.21)", "pandas", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio", "qtconsole", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "trio", "typing-extensions"]
-black = ["black"]
-doc = ["docrepr", "ipykernel", "matplotlib", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "typing-extensions"]
-kernel = ["ipykernel"]
-nbconvert = ["nbconvert"]
-nbformat = ["nbformat"]
-notebook = ["ipywidgets", "notebook"]
-parallel = ["ipyparallel"]
-qtconsole = ["qtconsole"]
-test = ["pytest (<7.1)", "pytest-asyncio", "testpath"]
-test-extra = ["curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.21)", "pandas", "pytest (<7.1)", "pytest-asyncio", "testpath", "trio"]
-
 [[package]]
 name = "ipython"
 version = "8.37.0"
@@ -2186,7 +1698,6 @@ description = "IPython: Productive Interactive Computing"
 optional = false
 python-versions = ">=3.10"
 groups = ["main", "dev"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "ipython-8.37.0-py3-none-any.whl", hash = "sha256:ed87326596b878932dbcb171e3e698845434d8c61b8d8cd474bf663041a9dcf2"},
     {file = "ipython-8.37.0.tar.gz", hash = "sha256:ca815841e1a41a1e6b73a0b08f3038af9b2252564d01fc405356d34033012216"},
@@ -2195,7 +1706,6 @@ files = [
 [package.dependencies]
 colorama = {version = "*", markers = "sys_platform == \"win32\""}
 decorator = "*"
-exceptiongroup = {version = "*", markers = "python_version < \"3.11\""}
 jedi = ">=0.16"
 matplotlib-inline = "*"
 pexpect = {version = ">4.3", markers = "sys_platform != \"win32\" and sys_platform != \"emscripten\""}
@@ -2346,48 +1856,6 @@ files = [
 [package.dependencies]
 itk-numerics = "5.4.4.post1"
 
-[[package]]
-name = "itk-meshtopolydata"
-version = "0.11.0"
-description = "Convert an ITK Mesh to a simple data structure compatible with vtkPolyData."
-optional = false
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-[package.dependencies]
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-
 [[package]]
 name = "itk-meshtopolydata"
 version = "0.11.1"
@@ -2395,7 +1863,6 @@ description = "Convert an ITK Mesh to a simple data structure compatible with vt
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
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-isoduration = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
-jsonpointer = {version = ">1.13", optional = true, markers = "extra == \"format-nongpl\""}
-jsonschema-specifications = ">=2023.03.6"
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-rfc3986-validator = {version = ">0.1.0", optional = true, markers = "extra == \"format-nongpl\""}
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-uri-template = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
-webcolors = {version = ">=24.6.0", optional = true, markers = "extra == \"format-nongpl\""}
-
-[package.extras]
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-
 [[package]]
 name = "jsonschema"
 version = "4.25.0"
@@ -2565,7 +1999,6 @@ description = "An implementation of JSON Schema validation for Python"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -2577,7 +2010,7 @@ fqdn = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
 idna = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
 isoduration = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
 jsonpointer = {version = ">1.13", optional = true, markers = "extra == \"format-nongpl\""}
-jsonschema-specifications = ">=2023.03.6"
+jsonschema-specifications = ">=2023.3.6"
 referencing = ">=0.28.4"
 rfc3339-validator = {version = "*", optional = true, markers = "extra == \"format-nongpl\""}
 rfc3986-validator = {version = ">0.1.0", optional = true, markers = "extra == \"format-nongpl\""}
@@ -2590,23 +2023,6 @@ webcolors = {version = ">=24.6.0", optional = true, markers = "extra == \"format
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 format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "rfc3987-syntax (>=1.1.0)", "uri-template", "webcolors (>=24.6.0)"]
 
-[[package]]
-name = "jsonschema-specifications"
-version = "2023.12.1"
-description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
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-[package.dependencies]
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-referencing = ">=0.31.0"
-
 [[package]]
 name = "jsonschema-specifications"
 version = "2025.4.1"
@@ -2614,7 +2030,6 @@ description = "The JSON Schema meta-schemas and vocabularies, exposed as a Regis
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -2669,33 +2084,6 @@ traitlets = ">=5.3"
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 test = ["ipykernel", "pre-commit", "pytest (<9)", "pytest-cov", "pytest-timeout"]
 
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-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
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-[package.dependencies]
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-referencing = "*"
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-traitlets = ">=5.3"
-
-[package.extras]
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-test = ["click", "pre-commit", "pytest (>=7.0)", "pytest-asyncio (>=0.19.0)", "pytest-console-scripts", "rich"]
-
 [[package]]
 name = "jupyter-events"
 version = "0.12.0"
@@ -2703,7 +2091,6 @@ description = "Jupyter Event System library"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
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@@ -2724,44 +2111,6 @@ cli = ["click", "rich"]
 docs = ["jupyterlite-sphinx", "myst-parser", "pydata-sphinx-theme (>=0.16)", "sphinx (>=8)", "sphinxcontrib-spelling"]
 test = ["click", "pre-commit", "pytest (>=7.0)", "pytest-asyncio (>=0.19.0)", "pytest-console-scripts", "rich"]
 
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-optional = false
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-groups = ["main"]
-markers = "python_version < \"3.10\""
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-[package.extras]
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-
 [[package]]
 name = "jupyter-server"
 version = "2.16.0"
@@ -2769,7 +2118,6 @@ description = "The backend—i.e. core services, APIs, and REST endpoints—to J
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -2814,7 +2162,6 @@ files = [
 
 [package.dependencies]
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 jupyter-server = ">=1.24.0"
 simpervisor = ">=1.0.0"
 tornado = ">=6.1.0"
@@ -2870,131 +2217,6 @@ files = [
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-
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 name = "kiwisolver"
 version = "1.4.8"
@@ -3002,7 +2224,6 @@ description = "A fast implementation of the Cassowary constraint solver"
 optional = false
 python-versions = ">=3.10"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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 python-versions = ">=3.8"
 groups = ["main"]
-markers = "python_version == \"3.10\""
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 lint = ["pre-commit (==3.7.0)"]
 test = ["pytest (>=7.4)", "pytest-cov (>=4.1)"]
 
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-
 [[package]]
 name = "lazy-object-proxy"
 version = "1.11.0"
@@ -3180,7 +2352,6 @@ description = "A fast and thorough lazy object proxy."
 optional = false
 python-versions = ">=3.9"
 groups = ["dev"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -3198,6 +2369,41 @@ files = [
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+python-versions = ">=3.10"
+groups = ["main"]
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+
 [[package]]
 name = "markdown-it-py"
 version = "3.0.0"
@@ -3223,77 +2429,6 @@ profiling = ["gprof2dot"]
 rtd = ["jupyter_sphinx", "mdit-py-plugins", "myst-parser", "pyyaml", "sphinx", "sphinx-copybutton", "sphinx-design", "sphinx_book_theme"]
 testing = ["coverage", "pytest", "pytest-cov", "pytest-regressions"]
 
-[[package]]
-name = "markupsafe"
-version = "2.1.5"
-description = "Safely add untrusted strings to HTML/XML markup."
-optional = false
-python-versions = ">=3.7"
-groups = ["main", "dev"]
-markers = "python_version < \"3.10\""
-files = [
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-]
-
 [[package]]
 name = "markupsafe"
 version = "3.0.2"
@@ -3301,7 +2436,6 @@ description = "Safely add untrusted strings to HTML/XML markup."
 optional = false
 python-versions = ">=3.9"
 groups = ["main", "dev"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -3367,74 +2501,44 @@ files = [
 ]
 
 [[package]]
-name = "matplotlib"
-version = "3.7.5"
-description = "Python plotting package"
-optional = false
-python-versions = ">=3.8"
+name = "matflow"
+version = "0.2.26"
+description = "Computational workflow management for materials science."
+optional = true
+python-versions = "*"
 groups = ["main"]
-markers = "python_version < \"3.10\""
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+black = "*"
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+hpcflow = ">=0.1.16"
+matflow-demo-extension = "*"
+numpy = "*"
+pyperclip = "*"
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+
+[[package]]
+name = "matflow-demo-extension"
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+description = "Demonstration extension for Matflow."
+optional = true
+python-versions = ">=3.6"
+groups = ["main"]
+markers = "extra == \"matflow\""
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+[package.dependencies]
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 name = "matplotlib"
@@ -3443,7 +2547,6 @@ description = "Python plotting package"
 optional = false
 python-versions = ">=3.10"
 groups = ["main"]
-markers = "python_version == \"3.10\""
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 [package.dependencies]
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-python-versions = "~=3.7"
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-
 [[package]]
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@@ -3554,7 +2641,6 @@ description = "Artist for matplotlib to display a scale bar"
 optional = false
 python-versions = ">=3.9"
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-groups = ["main"]
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-
-[package.dependencies]
-typing-extensions = {version = ">=4.1.0", markers = "python_version < \"3.11\""}
-
 [[package]]
 name = "multidict"
 version = "6.6.3"
@@ -3845,7 +2792,6 @@ description = "multidict implementation"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -3959,44 +2905,18 @@ files = [
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-[package.dependencies]
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-
 [[package]]
 name = "mypy-extensions"
 version = "1.1.0"
 description = "Type system extensions for programs checked with the mypy type checker."
 optional = false
 python-versions = ">=3.8"
-groups = ["dev"]
+groups = ["main", "dev"]
 files = [
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 ]
-
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-optional = false
-python-versions = ">=3.7"
-groups = ["main"]
-markers = "python_version < \"3.10\""
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-
-[package.dependencies]
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-ipython-genutils = "*"
-nest-asyncio = ">=1.5"
-notebook-shim = ">=0.2.3"
-
-[package.extras]
-docs = ["myst-parser", "nbsphinx", "sphinx", "sphinx-rtd-theme", "sphinxcontrib-github-alt"]
-json-logging = ["json-logging"]
-test = ["coverage", "nbval", "pytest", "pytest-cov", "pytest-jupyter", "pytest-playwright", "pytest-tornasync", "requests", "requests-unixsocket ; sys_platform != \"win32\"", "testpath"]
+markers = {main = "extra == \"matflow\""}
 
 [[package]]
 name = "nbclassic"
@@ -4005,7 +2925,6 @@ description = "Jupyter Notebook as a Jupyter Server extension."
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -4023,30 +2942,6 @@ docs = ["myst-parser", "nbsphinx", "sphinx", "sphinx-rtd-theme", "sphinxcontrib-
 json-logging = ["json-logging"]
 test = ["coverage", "nbval", "pytest", "pytest-cov", "pytest-jupyter", "pytest-playwright", "pytest-tornasync", "requests", "requests-unixsocket ; sys_platform != \"win32\"", "testpath"]
 
-[[package]]
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-version = "0.10.1"
-description = "A client library for executing notebooks. Formerly nbconvert's ExecutePreprocessor."
-optional = false
-python-versions = ">=3.8.0"
-groups = ["main"]
-markers = "python_version < \"3.10\""
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-jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
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-traitlets = ">=5.4"
-
-[package.extras]
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-
 [[package]]
 name = "nbclient"
 version = "0.10.2"
@@ -4054,7 +2949,6 @@ description = "A client library for executing notebooks. Formerly nbconvert's Ex
 optional = false
 python-versions = ">=3.9.0"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -4087,7 +2981,6 @@ files = [
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 defusedxml = "*"
-importlib-metadata = {version = ">=3.6", markers = "python_version < \"3.10\""}
 jinja2 = ">=3.0"
 jupyter-core = ">=4.7"
 jupyterlab-pygments = "*"
@@ -4143,26 +3036,6 @@ files = [
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 ]
 
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-description = "Python package for creating and manipulating graphs and networks"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
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-developer = ["mypy (>=1.1)", "pre-commit (>=3.2)"]
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-test = ["codecov (>=2.1)", "pytest (>=7.2)", "pytest-cov (>=4.0)"]
-
 [[package]]
 name = "networkx"
 version = "3.4.2"
@@ -4170,7 +3043,6 @@ description = "Python package for creating and manipulating graphs and networks"
 optional = false
 python-versions = ">=3.10"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -4250,46 +3122,43 @@ jupyter-server = ">=1.8,<3"
 test = ["pytest", "pytest-console-scripts", "pytest-jupyter", "pytest-tornasync"]
 
 [[package]]
-name = "numcodecs"
-version = "0.12.1"
-description = "A Python package providing buffer compression and transformation codecs for use in data storage and communication applications."
+name = "numba"
+version = "0.66.0"
+description = "compiling Python code using LLVM"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.10"
 groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
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 ]
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-
-[package.extras]
-test = ["hypothesis (>=5.5.3)", "pytest (>=6.0)", "pytest-xdist (>=1.31)"]
+python-dateutil = ">=2.8.2"
+tzdata = {version = "*", markers = "sys_platform == \"win32\" or sys_platform == \"emscripten\""}
+
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 [[package]]
 name = "pandocfilters"
@@ -4534,11 +3436,12 @@ version = "0.12.1"
 description = "Utility library for gitignore style pattern matching of file paths."
 optional = false
 python-versions = ">=3.8"
-groups = ["dev"]
+groups = ["main", "dev"]
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 ]
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 [[package]]
 name = "peakutils"
@@ -4563,7 +3466,7 @@ description = "Pexpect allows easy control of interactive console applications."
 optional = false
 python-versions = "*"
 groups = ["main", "dev"]
-markers = "python_version < \"3.10\" and sys_platform != \"win32\" or sys_platform != \"win32\" and sys_platform != \"emscripten\""
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@@ -4572,118 +3475,6 @@ files = [
 [package.dependencies]
 ptyprocess = ">=0.5"
 
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-python-versions = "*"
-groups = ["main", "dev"]
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-]
-
 [[package]]
 name = "propcache"
 version = "0.3.2"
@@ -5200,7 +3727,6 @@ description = "Accelerated property cache"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "propcache-0.3.2-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:22d9962a358aedbb7a2e36187ff273adeaab9743373a272976d2e348d08c7770"},
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@@ -5337,7 +3863,7 @@ files = [
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 ]
-markers = {main = "sys_platform != \"win32\" and python_version < \"3.10\" or sys_platform != \"win32\" and sys_platform != \"emscripten\" or os_name != \"nt\"", dev = "python_version < \"3.10\" and sys_platform != \"win32\" or sys_platform != \"win32\" and sys_platform != \"emscripten\""}
+markers = {main = "sys_platform != \"win32\" and sys_platform != \"emscripten\" or os_name != \"nt\"", dev = "sys_platform != \"win32\" and sys_platform != \"emscripten\""}
 
 [[package]]
 name = "pure-eval"
@@ -5366,6 +3892,19 @@ files = [
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 ]
 
+[[package]]
+name = "pycodestyle"
+version = "2.14.0"
+description = "Python style guide checker"
+optional = true
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "extra == \"matflow\""
+files = [
+    {file = "pycodestyle-2.14.0-py2.py3-none-any.whl", hash = "sha256:dd6bf7cb4ee77f8e016f9c8e74a35ddd9f67e1d5fd4184d86c3b98e07099f42d"},
+    {file = "pycodestyle-2.14.0.tar.gz", hash = "sha256:c4b5b517d278089ff9d0abdec919cd97262a3367449ea1c8b49b91529167b783"},
+]
+
 [[package]]
 name = "pycparser"
 version = "2.22"
@@ -5377,7 +3916,7 @@ files = [
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 ]
-markers = {dev = "implementation_name == \"pypy\""}
+markers = {main = "implementation_name != \"PyPy\" or python_version <= \"3.13\"", dev = "implementation_name == \"pypy\""}
 
 [[package]]
 name = "pydata-sphinx-theme"
@@ -5431,15 +3970,13 @@ files = [
 ]
 
 [package.dependencies]
-astroid = ">=2.15.8,<=2.17.0-dev0"
+astroid = ">=2.15.8,<=2.17.0.dev0"
 colorama = {version = ">=0.4.5", markers = "sys_platform == \"win32\""}
-dill = {version = ">=0.2", markers = "python_version < \"3.11\""}
+dill = {version = ">=0.3.6", markers = "python_version >= \"3.11\""}
 isort = ">=4.2.5,<6"
 mccabe = ">=0.6,<0.8"
 platformdirs = ">=2.2.0"
-tomli = {version = ">=1.1.0", markers = "python_version < \"3.11\""}
 tomlkit = ">=0.10.1"
-typing-extensions = {version = ">=3.10.0", markers = "python_version < \"3.10\""}
 
 [package.extras]
 spelling = ["pyenchant (>=3.2,<4.0)"]
@@ -5447,36 +3984,32 @@ testutils = ["gitpython (>3)"]
 
 [[package]]
 name = "pyparsing"
-version = "3.1.4"
+version = "3.2.3"
 description = "pyparsing module - Classes and methods to define and execute parsing grammars"
 optional = false
-python-versions = ">=3.6.8"
+python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version < \"3.10\""
 files = [
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+    {file = "pyparsing-3.2.3.tar.gz", hash = "sha256:b9c13f1ab8b3b542f72e28f634bad4de758ab3ce4546e4301970ad6fa77c38be"},
 ]
 
 [package.extras]
 diagrams = ["jinja2", "railroad-diagrams"]
 
 [[package]]
-name = "pyparsing"
-version = "3.2.3"
-description = "pyparsing module - Classes and methods to define and execute parsing grammars"
-optional = false
-python-versions = ">=3.9"
+name = "pyperclip"
+version = "1.11.0"
+description = "A cross-platform clipboard module for Python. (Only handles plain text for now.)"
+optional = true
+python-versions = "*"
 groups = ["main"]
-markers = "python_version == \"3.10\""
+markers = "extra == \"matflow\""
 files = [
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 ]
 
-[package.extras]
-diagrams = ["jinja2", "railroad-diagrams"]
-
 [[package]]
 name = "pytest"
 version = "6.2.5"
@@ -5529,25 +4062,9 @@ files = [
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 ]
 
-[package.dependencies]
-typing_extensions = {version = "*", markers = "python_version < \"3.10\""}
-
 [package.extras]
 dev = ["backports.zoneinfo ; python_version < \"3.9\"", "black", "build", "freezegun", "mdx_truly_sane_lists", "mike", "mkdocs", "mkdocs-awesome-pages-plugin", "mkdocs-gen-files", "mkdocs-literate-nav", "mkdocs-material (>=8.5)", "mkdocstrings[python]", "msgspec ; implementation_name != \"pypy\"", "mypy", "orjson ; implementation_name != \"pypy\"", "pylint", "pytest", "tzdata", "validate-pyproject[all]"]
 
-[[package]]
-name = "pytz"
-version = "2025.2"
-description = "World timezone definitions, modern and historical"
-optional = false
-python-versions = "*"
-groups = ["main", "dev"]
-files = [
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-]
-markers = {dev = "python_version == \"3.8\""}
-
 [[package]]
 name = "pyvista"
 version = "0.43.10"
@@ -5587,48 +4104,9 @@ io = ["imageio", "meshio (>=5.2)"]
 jupyter = ["ipywidgets", "jupyter-server-proxy", "nest-asyncio", "trame (>=2.5.2)", "trame-client (>=2.12.7)", "trame-server (>=2.11.7)", "trame-vtk (>=2.5.8)", "trame-vuetify (>=2.3.1)"]
 
 [[package]]
-name = "pywavelets"
-version = "1.4.1"
-description = "PyWavelets, wavelet transform module"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
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-    {file = "PyWavelets-1.4.1.tar.gz", hash = "sha256:6437af3ddf083118c26d8f97ab43b0724b956c9f958e9ea788659f6a2834ba93"},
-]
-
-[package.dependencies]
-numpy = ">=1.17.3"
-
-[[package]]
-name = "pywin32"
-version = "311"
-description = "Python for Window Extensions"
+name = "pywin32"
+version = "311"
+description = "Python for Window Extensions"
 optional = false
 python-versions = "*"
 groups = ["main", "dev"]
@@ -5656,23 +4134,6 @@ files = [
     {file = "pywin32-311-cp39-cp39-win_arm64.whl", hash = "sha256:62ea666235135fee79bb154e695f3ff67370afefd71bd7fea7512fc70ef31e3d"},
 ]
 
-[[package]]
-name = "pywinpty"
-version = "2.0.14"
-description = "Pseudo terminal support for Windows from Python."
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\" and os_name == \"nt\""
-files = [
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-    {file = "pywinpty-2.0.14.tar.gz", hash = "sha256:18bd9529e4a5daf2d9719aa17788ba6013e594ae94c5a0c27e83df3278b0660e"},
-]
-
 [[package]]
 name = "pywinpty"
 version = "2.0.15"
@@ -5680,7 +4141,7 @@ description = "Pseudo terminal support for Windows from Python."
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\" and os_name == \"nt\""
+markers = "os_name == \"nt\""
 files = [
     {file = "pywinpty-2.0.15-cp310-cp310-win_amd64.whl", hash = "sha256:8e7f5de756a615a38b96cd86fa3cd65f901ce54ce147a3179c45907fa11b4c4e"},
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@@ -5877,23 +4338,6 @@ prompt_toolkit = ">=2.0,<4.0"
 [package.extras]
 docs = ["Sphinx (>=3.3,<4.0)", "sphinx-autobuild (>=2020.9.1,<2021.0.0)", "sphinx-autodoc-typehints (>=1.11.1,<2.0.0)", "sphinx-copybutton (>=0.3.1,<0.4.0)", "sphinx-rtd-theme (>=0.5.0,<0.6.0)"]
 
-[[package]]
-name = "referencing"
-version = "0.35.1"
-description = "JSON Referencing + Python"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
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-    {file = "referencing-0.35.1.tar.gz", hash = "sha256:25b42124a6c8b632a425174f24087783efb348a6f1e0008e63cd4466fedf703c"},
-]
-
-[package.dependencies]
-attrs = ">=22.2.0"
-rpds-py = ">=0.7.0"
-
 [[package]]
 name = "referencing"
 version = "0.36.2"
@@ -5901,7 +4345,6 @@ description = "JSON Referencing + Python"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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 optional = false
 python-versions = ">=3.9"
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 version = "1.15.3"
@@ -6561,7 +4681,6 @@ description = "Fundamental algorithms for scientific computing in Python"
 optional = false
 python-versions = ">=3.10"
 groups = ["main"]
-markers = "python_version == \"3.10\""
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 Jinja2 = ">=2.3"
 packaging = "*"
 Pygments = ">=2.0"
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 sphinx = ">4.2.0"
 
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-[package.extras]
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 [[package]]
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 version = "2.0.0"
@@ -6810,7 +4911,6 @@ description = "sphinxcontrib-applehelp is a Sphinx extension which outputs Apple
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 groups = ["dev"]
-markers = "python_version == \"3.10\""
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 [[package]]
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 [[package]]
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 [[package]]
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 [[package]]
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 standalone = ["Sphinx (>=5)"]
 test = ["pytest"]
 
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+typing-extensions = ">=4.6.0"
+
+[package.extras]
+aiomysql = ["aiomysql (>=0.2.0)", "greenlet (>=1)"]
+aioodbc = ["aioodbc", "greenlet (>=1)"]
+aiosqlite = ["aiosqlite", "greenlet (>=1)", "typing_extensions (!=3.10.0.1)"]
+asyncio = ["greenlet (>=1)"]
+asyncmy = ["asyncmy (>=0.2.3,!=0.2.4,!=0.2.6)", "greenlet (>=1)"]
+mariadb-connector = ["mariadb (>=1.0.1,!=1.1.2,!=1.1.5,!=1.1.10)"]
+mssql = ["pyodbc"]
+mssql-pymssql = ["pymssql"]
+mssql-pyodbc = ["pyodbc"]
+mypy = ["mypy (>=0.910)"]
+mysql = ["mysqlclient (>=1.4.0)"]
+mysql-connector = ["mysql-connector-python"]
+oracle = ["cx_oracle (>=8)"]
+oracle-oracledb = ["oracledb (>=1.0.1)"]
+postgresql = ["psycopg2 (>=2.7)"]
+postgresql-asyncpg = ["asyncpg", "greenlet (>=1)"]
+postgresql-pg8000 = ["pg8000 (>=1.29.1)"]
+postgresql-psycopg = ["psycopg (>=3.0.7)"]
+postgresql-psycopg2binary = ["psycopg2-binary"]
+postgresql-psycopg2cffi = ["psycopg2cffi"]
+postgresql-psycopgbinary = ["psycopg[binary] (>=3.0.7)"]
+pymysql = ["pymysql"]
+sqlcipher = ["sqlcipher3_binary"]
+
 [[package]]
 name = "stack-data"
 version = "0.6.3"
@@ -6996,23 +5122,6 @@ pure-eval = "*"
 [package.extras]
 tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"]
 
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-name = "tenacity"
-version = "9.0.0"
-description = "Retry code until it succeeds"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
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-test = ["pytest", "tornado (>=4.5)", "typeguard"]
-
 [[package]]
 name = "tenacity"
 version = "9.1.2"
@@ -7020,7 +5129,6 @@ description = "Retry code until it succeeds"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
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@@ -7030,22 +5138,6 @@ files = [
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 test = ["pytest", "tornado (>=4.5)", "typeguard"]
 
-[[package]]
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-description = "ANSI color formatting for output in terminal"
-optional = false
-python-versions = ">=3.8"
-groups = ["dev"]
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-[package.extras]
-tests = ["pytest", "pytest-cov"]
-
 [[package]]
 name = "termcolor"
 version = "2.5.0"
@@ -7053,7 +5145,6 @@ description = "ANSI color formatting for output in terminal"
 optional = false
 python-versions = ">=3.9"
 groups = ["dev"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -7084,25 +5175,6 @@ docs = ["myst-parser", "pydata-sphinx-theme", "sphinx"]
 test = ["pre-commit", "pytest (>=7.0)", "pytest-timeout"]
 typing = ["mypy (>=1.6,<2.0)", "traitlets (>=5.11.1)"]
 
-[[package]]
-name = "tifffile"
-version = "2023.7.10"
-description = "Read and write TIFF files"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
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-[package.dependencies]
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-
-[package.extras]
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-
 [[package]]
 name = "tifffile"
 version = "2025.5.10"
@@ -7110,7 +5182,6 @@ description = "Read and write TIFF files"
 optional = false
 python-versions = ">=3.10"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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@@ -7127,26 +5198,6 @@ test = ["cmapfile", "czifile", "dask", "defusedxml", "fsspec", "imagecodecs", "l
 xml = ["defusedxml", "lxml"]
 zarr = ["fsspec", "zarr (<3)"]
 
-[[package]]
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-groups = ["main"]
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-test = ["flake8", "isort", "pytest"]
-
 [[package]]
 name = "tinycss2"
 version = "1.4.0"
@@ -7154,7 +5205,6 @@ description = "A tiny CSS parser"
 optional = false
 python-versions = ">=3.8"
 groups = ["main"]
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-description = "A lil' TOML parser"
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-python-versions = ">=3.8"
-groups = ["dev"]
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 [[package]]
 name = "tomlkit"
 version = "0.13.3"
@@ -7233,28 +5241,6 @@ files = [
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-python-versions = ">=3.8"
-groups = ["main", "dev"]
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-
 [[package]]
 name = "tornado"
 version = "6.5.1"
@@ -7262,7 +5248,6 @@ description = "Tornado is a Python web framework and asynchronous networking lib
 optional = false
 python-versions = ">=3.9"
 groups = ["main", "dev"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "tornado-6.5.1-cp39-abi3-macosx_10_9_universal2.whl", hash = "sha256:d50065ba7fd11d3bd41bcad0825227cc9a95154bad83239357094c36708001f7"},
     {file = "tornado-6.5.1-cp39-abi3-macosx_10_9_x86_64.whl", hash = "sha256:9e9ca370f717997cb85606d074b0e5b247282cf5e2e1611568b8821afe0342d6"},
@@ -7314,46 +5299,27 @@ test = ["numpy", "pandas", "pytest", "xarray"]
 
 [[package]]
 name = "trame"
-version = "2.5.2"
+version = "3.11.0"
 description = "Trame, a framework to build applications in plain Python"
 optional = false
-python-versions = "*"
+python-versions = ">=3.9"
 groups = ["main"]
 files = [
-    {file = "trame-2.5.2-py3-none-any.whl", hash = "sha256:2948be7691cbcbbfa64144581acc825a669bb47a2d76b78d728db21be008daa5"},
-    {file = "trame-2.5.2.tar.gz", hash = "sha256:875320353517c133312e46dc87c66050f721f045fd8817cd394fe06363e84ce2"},
+    {file = "trame-3.11.0-py3-none-any.whl", hash = "sha256:12e395fc061b10882f6ed4316f91f364704b66551970efbfc00a564416f23a44"},
+    {file = "trame-3.11.0.tar.gz", hash = "sha256:cd81f1b1f9edab4d85aa0abf4503ac62d73f7fc4709354066eb1494690970fba"},
 ]
 
 [package.dependencies]
-trame-client = ">=2.7.7"
-trame-components = "<3.0.0"
-trame-deckgl = "<3.0.0"
-trame-markdown = "<3.0.0"
-trame-matplotlib = "<3.0.0"
-trame-plotly = "<3.0.0"
-trame-rca = "<3.0.0"
-trame-router = "<3.0.0"
-trame-server = ">=2.11.7"
-trame-simput = "<3.0.0"
-trame-vega = "<3.0.0"
-trame-vtk = "<3.0.0"
-trame-vuetify = "<3.0.0"
-
-[[package]]
-name = "trame-client"
-version = "3.5.0"
-description = "Internal client of trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "trame-client-3.5.0.tar.gz", hash = "sha256:e472255608e00bbb3683a805b97825e819326abb01ae007c3121606355691c25"},
-    {file = "trame_client-3.5.0-py3-none-any.whl", hash = "sha256:5eff22c68859f88fe0ff7ad3d814e95f81c105e1296f292a47006571d9f9659f"},
-]
+pyyaml = "*"
+trame-client = ">=3.8,<4"
+trame-common = ">=1,<2"
+trame-server = ">=3.4,<4"
+wslink = ">=2.3.3"
 
 [package.extras]
-test = ["Pillow", "pixelmatch", "pytest", "pytest-xprocess", "seleniumbase"]
+app = ["pywebview"]
+dev = ["pre-commit", "pytest", "ruff"]
+jupyter = ["jupyterlab"]
 
 [[package]]
 name = "trame-client"
@@ -7362,7 +5328,6 @@ description = "Internal client of trame"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "trame_client-3.9.2-py3-none-any.whl", hash = "sha256:574a3512673623a59308ba44ad1ebd60a86d00ddd30b0be417acb914ea45d817"},
     {file = "trame_client-3.9.2.tar.gz", hash = "sha256:441ca8be60d0eac3eae0e47309ac41202fcf278eb732cc7e82661ee23251b7ef"},
@@ -7382,7 +5347,6 @@ description = "Dependency less classes and functions for trame"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "trame_common-1.0.1-py3-none-any.whl", hash = "sha256:b8f568a6f917a511f9e24060e20b8a95860729b10307ac04d2336d6780e3a2e6"},
     {file = "trame_common-1.0.1.tar.gz", hash = "sha256:9d4af2d9a6d08a7405977f459931cab9d4b53ae120a80264545f679d1f9a94bc"},
@@ -7392,139 +5356,6 @@ files = [
 dev = ["nox", "pre-commit", "pytest (>=6)", "pytest-cov (>=3)", "ruff"]
 test = ["nox", "pytest (>=6)", "pytest-cov (>=3)"]
 
-[[package]]
-name = "trame-components"
-version = "2.5.0"
-description = "Core components for trame widgets"
-optional = false
-python-versions = "*"
-groups = ["main"]
-files = [
-    {file = "trame-components-2.5.0.tar.gz", hash = "sha256:df7a1d387b98c5dd71699737804f5288957ca370eb1a60bbe40e89a1f9f62b12"},
-    {file = "trame_components-2.5.0-py3-none-any.whl", hash = "sha256:897a6c0ebcc72d95a461bde28d2c2e37c4bc4922013ad07df3a65e64d4884672"},
-]
-
-[package.dependencies]
-trame-client = "*"
-
-[[package]]
-name = "trame-deckgl"
-version = "2.0.3"
-description = "Deck.gl widget for trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-files = [
-    {file = "trame-deckgl-2.0.3.tar.gz", hash = "sha256:0eeb3aa4e3f62c1380c7a8afde3f0530db72e9b145895c3e23ac557709949194"},
-    {file = "trame_deckgl-2.0.3-py3-none-any.whl", hash = "sha256:56bc537e6e06861c82b949ce70ef6957762dd502caf9d33ff53ff9d0198fbc79"},
-]
-
-[package.dependencies]
-trame-client = "*"
-
-[[package]]
-name = "trame-markdown"
-version = "2.0.2"
-description = "Markdown widget for trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-files = [
-    {file = "trame-markdown-2.0.2.tar.gz", hash = "sha256:7d4979acb0b2382c144aaa461825b76bde4dc4120869c1a7dda41543485cafc6"},
-    {file = "trame_markdown-2.0.2-py3-none-any.whl", hash = "sha256:bc529eb9084b2f6dcf9631b94a0cabdb83a2da379075aadd45071eef1a686d57"},
-]
-
-[package.dependencies]
-trame-client = "*"
-
-[[package]]
-name = "trame-matplotlib"
-version = "2.0.3"
-description = "Markdown widget for trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-files = [
-    {file = "trame-matplotlib-2.0.3.tar.gz", hash = "sha256:4cf0beb092fc2b11988480346a0cae3ce5fe0267429c7876727a8389bded5cd6"},
-    {file = "trame_matplotlib-2.0.3-py3-none-any.whl", hash = "sha256:e221605f0ad8c5c3677c09f49f6881bedd0eab16a2b24824a8e0fd013267a698"},
-]
-
-[package.dependencies]
-mpld3 = "*"
-trame-client = "*"
-
-[[package]]
-name = "trame-plotly"
-version = "2.1.1"
-description = "Plotly figure widget for trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-files = [
-    {file = "trame-plotly-2.1.1.tar.gz", hash = "sha256:cecc5b0daa5f2d704e4e5e16a3ddb814809bb559237646f1123ef3c01824bedf"},
-    {file = "trame_plotly-2.1.1-py3-none-any.whl", hash = "sha256:a9ee9418bc088225dfa589d4b9e711686124b1b4880bc51b4fffd98643f91066"},
-]
-
-[package.dependencies]
-trame-client = "*"
-
-[[package]]
-name = "trame-rca"
-version = "0.7.0"
-description = "Remote Controlled Area widget for trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "trame-rca-0.7.0.tar.gz", hash = "sha256:bbd12324dd2943a59cc08bfaa8cdaeb39e1fc998e8f014fb050fe5b7480aa24e"},
-    {file = "trame_rca-0.7.0-py3-none-any.whl", hash = "sha256:82f2b1d4ca8fa5d33a0c06f2b517e859a2729fe047081db29d0fb985d57de082"},
-]
-
-[package.dependencies]
-trame-client = "*"
-wslink = "*"
-
-[[package]]
-name = "trame-rca"
-version = "2.1.3"
-description = "Remote Controlled Area widget for trame"
-optional = false
-python-versions = ">=3.9"
-groups = ["main"]
-markers = "python_version == \"3.10\""
-files = [
-    {file = "trame_rca-2.1.3-py3-none-any.whl", hash = "sha256:f23b9ed45800b3a075c7ca91a2c0b85d6025a368ef113defcae521411bf32627"},
-    {file = "trame_rca-2.1.3.tar.gz", hash = "sha256:d66e8ebfafab921b8920eb0344a809664b9dd57107cdded5f85244e596ea13d4"},
-]
-
-[package.dependencies]
-numpy = "*"
-packaging = "*"
-pillow = "*"
-pillow-avif-plugin = "*"
-trame-client = ">=3.4,<4"
-wslink = ">=2.1.3"
-
-[package.extras]
-dev = ["pre-commit", "pytest", "ruff"]
-turbo = ["PyTurboJPEG"]
-
-[[package]]
-name = "trame-router"
-version = "2.3.0"
-description = "Vue Router widgets for trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-files = [
-    {file = "trame-router-2.3.0.tar.gz", hash = "sha256:b382bdaad59998d5fcb93613a6e6828d68ff168eff87df56b13604a331294216"},
-    {file = "trame_router-2.3.0-py3-none-any.whl", hash = "sha256:b1d2b94ead3d6d9a731e544a7fbb343788b71e1c4139f2a5e17f19c5f4fa344d"},
-]
-
-[package.dependencies]
-trame-client = "*"
-
 [[package]]
 name = "trame-server"
 version = "3.6.0"
@@ -7544,53 +5375,6 @@ wslink = ">=2.2.2,<3"
 [package.extras]
 dev = ["nox", "pre-commit", "pytest", "pytest-asyncio", "ruff"]
 
-[[package]]
-name = "trame-simput"
-version = "2.6.0"
-description = "Simput implementation for trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-files = [
-    {file = "trame_simput-2.6.0-py3-none-any.whl", hash = "sha256:ad0541495df11ac7f7f0ec8d68b71dbd774111a6f3eadf6766fd8aebcf910cd0"},
-    {file = "trame_simput-2.6.0.tar.gz", hash = "sha256:42258e1e8125c8637ff8c45462a9e72429a6f39e53bee6f1c7e48f8a5704f28a"},
-]
-
-[package.dependencies]
-pyyaml = "*"
-trame-client = "*"
-
-[[package]]
-name = "trame-vega"
-version = "2.1.1"
-description = "Vega widget for trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-files = [
-    {file = "trame-vega-2.1.1.tar.gz", hash = "sha256:a3d82f7535a66a782262647001987dba3ad0ddc64ce21225a4cfccd351fed8fa"},
-    {file = "trame_vega-2.1.1-py3-none-any.whl", hash = "sha256:044ea338f74fe83e7a5eca15fd1723b3b5f2847d5ca0ed2f0325e30d7676b6c9"},
-]
-
-[package.dependencies]
-trame-client = "*"
-
-[[package]]
-name = "trame-vtk"
-version = "2.8.13"
-description = "VTK widgets for trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "trame-vtk-2.8.13.tar.gz", hash = "sha256:b7438744c3a790a1c13c082b887f5abcd5132fe791ff631239a2cdce131dbcca"},
-    {file = "trame_vtk-2.8.13-py3-none-any.whl", hash = "sha256:ba2a51c4dfad369e1c31e8a9676c8e9c69ebd677daa2c45dd54f94dfd3c91136"},
-]
-
-[package.dependencies]
-trame-client = "*"
-
 [[package]]
 name = "trame-vtk"
 version = "2.9.1"
@@ -7598,7 +5382,6 @@ description = "VTK widgets for trame"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "trame_vtk-2.9.1-py3-none-any.whl", hash = "sha256:e01d3d9ef7781cbdadafc9d543c30221310c022c2091fd7973da67053d572a72"},
     {file = "trame_vtk-2.9.1.tar.gz", hash = "sha256:2423f0cb7c019bd919d313e904ab8de2fe1dbfc5e3ff77961fc13ea9d1b89594"},
@@ -7610,22 +5393,6 @@ trame-client = ">=3.4,<4"
 [package.extras]
 dev = ["coverage", "nox", "pre-commit", "pytest", "pytest-asyncio", "ruff"]
 
-[[package]]
-name = "trame-vuetify"
-version = "2.7.2"
-description = "Vuetify widgets for trame"
-optional = false
-python-versions = "*"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "trame-vuetify-2.7.2.tar.gz", hash = "sha256:b1489207c072345250baaea3b9a4b22fdca480bb58b195110eb779b0f60167b3"},
-    {file = "trame_vuetify-2.7.2-py3-none-any.whl", hash = "sha256:08d682d6da82b0325e267b0ad7636cf37f4563acf396aafd55a3a0e21b5213b2"},
-]
-
-[package.dependencies]
-trame-client = "*"
-
 [[package]]
 name = "trame-vuetify"
 version = "2.9.0"
@@ -7633,7 +5400,6 @@ description = "Vuetify widgets for trame"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "trame_vuetify-2.9.0-py3-none-any.whl", hash = "sha256:3db6a6b3384c313befb9d8f0eaf39a9e6cd1d2b882babd1c85d8779ff0f4f2bc"},
     {file = "trame_vuetify-2.9.0.tar.gz", hash = "sha256:86cfa1387b97e9f18d15ce98ee238b6e6c0e0f921935aab6737ae0bed74ee70a"},
@@ -7645,19 +5411,6 @@ trame-client = ">=3.4,<4"
 [package.extras]
 dev = ["pre-commit", "pytest", "ruff"]
 
-[[package]]
-name = "types-python-dateutil"
-version = "2.9.0.20241206"
-description = "Typing stubs for python-dateutil"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "types_python_dateutil-2.9.0.20241206-py3-none-any.whl", hash = "sha256:e248a4bc70a486d3e3ec84d0dc30eec3a5f979d6e7ee4123ae043eedbb987f53"},
-    {file = "types_python_dateutil-2.9.0.20241206.tar.gz", hash = "sha256:18f493414c26ffba692a72369fea7a154c502646301ebfe3d56a04b3767284cb"},
-]
-
 [[package]]
 name = "types-python-dateutil"
 version = "2.9.0.20250708"
@@ -7665,25 +5418,11 @@ description = "Typing stubs for python-dateutil"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "types_python_dateutil-2.9.0.20250708-py3-none-any.whl", hash = "sha256:4d6d0cc1cc4d24a2dc3816024e502564094497b713f7befda4d5bc7a8e3fd21f"},
     {file = "types_python_dateutil-2.9.0.20250708.tar.gz", hash = "sha256:ccdbd75dab2d6c9696c350579f34cffe2c281e4c5f27a585b2a2438dd1d5c8ab"},
 ]
 
-[[package]]
-name = "typing-extensions"
-version = "4.13.2"
-description = "Backported and Experimental Type Hints for Python 3.8+"
-optional = false
-python-versions = ">=3.8"
-groups = ["main", "dev"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "typing_extensions-4.13.2-py3-none-any.whl", hash = "sha256:a439e7c04b49fec3e5d3e2beaa21755cadbbdc391694e28ccdd36ca4a1408f8c"},
-    {file = "typing_extensions-4.13.2.tar.gz", hash = "sha256:e6c81219bd689f51865d9e372991c540bda33a0379d5573cddb9a3a23f7caaef"},
-]
-
 [[package]]
 name = "typing-extensions"
 version = "4.14.1"
@@ -7691,12 +5430,24 @@ description = "Backported and Experimental Type Hints for Python 3.9+"
 optional = false
 python-versions = ">=3.9"
 groups = ["main", "dev"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "typing_extensions-4.14.1-py3-none-any.whl", hash = "sha256:d1e1e3b58374dc93031d6eda2420a48ea44a36c2b4766a4fdeb3710755731d76"},
     {file = "typing_extensions-4.14.1.tar.gz", hash = "sha256:38b39f4aeeab64884ce9f74c94263ef78f3c22467c8724005483154c26648d36"},
 ]
 
+[[package]]
+name = "tzdata"
+version = "2026.3"
+description = "Provider of IANA time zone data"
+optional = false
+python-versions = ">=2"
+groups = ["main"]
+markers = "sys_platform == \"win32\" or sys_platform == \"emscripten\""
+files = [
+    {file = "tzdata-2026.3-py2.py3-none-any.whl", hash = "sha256:dc096730c87af6cab1b171c9d532be840741ff5d459015e7f6947bd7d7e54931"},
+    {file = "tzdata-2026.3.tar.gz", hash = "sha256:4a1518b8993086a7982523e071643f3c0e5f213e75b21318e78bcabfff9d1415"},
+]
+
 [[package]]
 name = "uri-template"
 version = "1.3.0"
@@ -7712,25 +5463,6 @@ files = [
 [package.extras]
 dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake8-commas", "flake8-comprehensions", "flake8-continuation", "flake8-datetimez", "flake8-docstrings", "flake8-import-order", "flake8-literal", "flake8-modern-annotations", "flake8-noqa", "flake8-pyproject", "flake8-requirements", "flake8-typechecking-import", "flake8-use-fstring", "mypy", "pep8-naming", "types-PyYAML"]
 
-[[package]]
-name = "urllib3"
-version = "2.2.3"
-description = "HTTP library with thread-safe connection pooling, file post, and more."
-optional = false
-python-versions = ">=3.8"
-groups = ["main", "dev"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "urllib3-2.2.3-py3-none-any.whl", hash = "sha256:ca899ca043dcb1bafa3e262d73aa25c465bfb49e0bd9dd5d59f1d0acba2f8fac"},
-    {file = "urllib3-2.2.3.tar.gz", hash = "sha256:e7d814a81dad81e6caf2ec9fdedb284ecc9c73076b62654547cc64ccdcae26e9"},
-]
-
-[package.extras]
-brotli = ["brotli (>=1.0.9) ; platform_python_implementation == \"CPython\"", "brotlicffi (>=0.8.0) ; platform_python_implementation != \"CPython\""]
-h2 = ["h2 (>=4,<5)"]
-socks = ["pysocks (>=1.5.6,!=1.5.7,<2.0)"]
-zstd = ["zstandard (>=0.18.0)"]
-
 [[package]]
 name = "urllib3"
 version = "2.5.0"
@@ -7738,7 +5470,6 @@ description = "HTTP library with thread-safe connection pooling, file post, and
 optional = false
 python-versions = ">=3.9"
 groups = ["main", "dev"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "urllib3-2.5.0-py3-none-any.whl", hash = "sha256:e6b01673c0fa6a13e374b50871808eb3bf7046c4b125b216f6bf1cc604cff0dc"},
     {file = "urllib3-2.5.0.tar.gz", hash = "sha256:3fc47733c7e419d4bc3f6b3dc2b4f890bb743906a30d56ba4a5bfa4bbff92760"},
@@ -7844,23 +5575,6 @@ files = [
     {file = "wcwidth-0.2.13.tar.gz", hash = "sha256:72ea0c06399eb286d978fdedb6923a9eb47e1c486ce63e9b4e64fc18303972b5"},
 ]
 
-[[package]]
-name = "webcolors"
-version = "24.8.0"
-description = "A library for working with the color formats defined by HTML and CSS."
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "webcolors-24.8.0-py3-none-any.whl", hash = "sha256:fc4c3b59358ada164552084a8ebee637c221e4059267d0f8325b3b560f6c7f0a"},
-    {file = "webcolors-24.8.0.tar.gz", hash = "sha256:08b07af286a01bcd30d583a7acadf629583d1f79bfef27dd2c2c5c263817277d"},
-]
-
-[package.extras]
-docs = ["furo", "sphinx", "sphinx-copybutton", "sphinx-inline-tabs", "sphinx-notfound-page", "sphinxext-opengraph"]
-tests = ["coverage[toml]"]
-
 [[package]]
 name = "webcolors"
 version = "24.11.1"
@@ -7868,7 +5582,6 @@ description = "A library for working with the color formats defined by HTML and
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
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-    {file = "yarl-1.15.2-cp39-cp39-musllinux_1_2_ppc64le.whl", hash = "sha256:173866d9f7409c0fb514cf6e78952e65816600cb888c68b37b41147349fe0057"},
-    {file = "yarl-1.15.2-cp39-cp39-musllinux_1_2_s390x.whl", hash = "sha256:6e840553c9c494a35e449a987ca2c4f8372668ee954a03a9a9685075228e5036"},
-    {file = "yarl-1.15.2-cp39-cp39-musllinux_1_2_x86_64.whl", hash = "sha256:458c0c65802d816a6b955cf3603186de79e8fdb46d4f19abaec4ef0a906f50a7"},
-    {file = "yarl-1.15.2-cp39-cp39-win32.whl", hash = "sha256:5b48388ded01f6f2429a8c55012bdbd1c2a0c3735b3e73e221649e524c34a58d"},
-    {file = "yarl-1.15.2-cp39-cp39-win_amd64.whl", hash = "sha256:81dadafb3aa124f86dc267a2168f71bbd2bfb163663661ab0038f6e4b8edb810"},
-    {file = "yarl-1.15.2-py3-none-any.whl", hash = "sha256:0d3105efab7c5c091609abacad33afff33bdff0035bece164c98bcf5a85ef90a"},
-    {file = "yarl-1.15.2.tar.gz", hash = "sha256:a39c36f4218a5bb668b4f06874d676d35a035ee668e6e7e3538835c703634b84"},
-]
-
-[package.dependencies]
-idna = ">=2.0"
-multidict = ">=4.0"
-propcache = ">=0.2.0"
-
 [[package]]
 name = "yarl"
 version = "1.20.1"
@@ -8147,7 +5746,6 @@ description = "Yet another URL library"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "yarl-1.20.1-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:6032e6da6abd41e4acda34d75a816012717000fa6839f37124a47fcefc49bec4"},
     {file = "yarl-1.20.1-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:2c7b34d804b8cf9b214f05015c4fee2ebe7ed05cf581e7192c06555c71f4446a"},
@@ -8260,29 +5858,6 @@ idna = ">=2.0"
 multidict = ">=4.0"
 propcache = ">=0.2.1"
 
-[[package]]
-name = "zarr"
-version = "2.16.1"
-description = "An implementation of chunked, compressed, N-dimensional arrays for Python"
-optional = false
-python-versions = ">=3.8"
-groups = ["main"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "zarr-2.16.1-py3-none-any.whl", hash = "sha256:de4882433ccb5b42cc1ec9872b95e64ca3a13581424666b28ed265ad76c7056f"},
-    {file = "zarr-2.16.1.tar.gz", hash = "sha256:4276cf4b4a653431042cd53ff2282bc4d292a6842411e88529964504fb073286"},
-]
-
-[package.dependencies]
-asciitree = "*"
-fasteners = "*"
-numcodecs = ">=0.10.0"
-numpy = ">=1.20,<1.21.0 || >1.21.0"
-
-[package.extras]
-docs = ["numcodecs[msgpack]", "numpydoc", "pydata-sphinx-theme", "sphinx", "sphinx-copybutton", "sphinx-design", "sphinx-issues", "sphinx-rtd-theme"]
-jupyter = ["ipytree (>=0.2.2)", "ipywidgets (>=8.0.0)", "notebook"]
-
 [[package]]
 name = "zarr"
 version = "2.18.3"
@@ -8290,7 +5865,6 @@ description = "An implementation of chunked, compressed, N-dimensional arrays fo
 optional = false
 python-versions = ">=3.10"
 groups = ["main"]
-markers = "python_version == \"3.10\""
 files = [
     {file = "zarr-2.18.3-py3-none-any.whl", hash = "sha256:b1f7dfd2496f436745cdd4c7bcf8d3b4bc1dceef5fdd0d589c87130d842496dd"},
     {file = "zarr-2.18.3.tar.gz", hash = "sha256:2580d8cb6dd84621771a10d31c4d777dca8a27706a1a89b29f42d2d37e2df5ce"},
@@ -8306,27 +5880,6 @@ numpy = ">=1.24"
 docs = ["numcodecs[msgpack]", "numpydoc", "pydata-sphinx-theme", "sphinx", "sphinx-automodapi", "sphinx-copybutton", "sphinx-design", "sphinx-issues"]
 jupyter = ["ipytree (>=0.2.2)", "ipywidgets (>=8.0.0)", "notebook"]
 
-[[package]]
-name = "zipp"
-version = "3.20.2"
-description = "Backport of pathlib-compatible object wrapper for zip files"
-optional = false
-python-versions = ">=3.8"
-groups = ["main", "dev"]
-markers = "python_version < \"3.10\""
-files = [
-    {file = "zipp-3.20.2-py3-none-any.whl", hash = "sha256:a817ac80d6cf4b23bf7f2828b7cabf326f15a001bea8b1f9b49631780ba28350"},
-    {file = "zipp-3.20.2.tar.gz", hash = "sha256:bc9eb26f4506fda01b81bcde0ca78103b6e62f991b381fec825435c836edbc29"},
-]
-
-[package.extras]
-check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1) ; sys_platform != \"cygwin\""]
-cover = ["pytest-cov"]
-doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
-enabler = ["pytest-enabler (>=2.2)"]
-test = ["big-O", "importlib-resources ; python_version < \"3.9\"", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-ignore-flaky"]
-type = ["pytest-mypy"]
-
 [[package]]
 name = "zstandard"
 version = "0.23.0"
@@ -8441,11 +5994,11 @@ cffi = {version = ">=1.11", markers = "platform_python_implementation == \"PyPy\
 cffi = ["cffi (>=1.11)"]
 
 [extras]
-hickle = []
-matflow = []
+hickle = ["hickle"]
+matflow = ["hickle", "matflow", "sqlalchemy"]
 notebook = ["notebook"]
 
 [metadata]
 lock-version = "2.1"
-python-versions = ">=3.8,<3.11"
-content-hash = "8a7fbbae86d1331103591049cf21db70be87540acb703b3292272e0f723521bc"
+python-versions = ">=3.11,<4"
+content-hash = "0c527da0aa991057539fb32c586922b4f3b42fddbf4f0dfa678479128fab2512"
diff --git a/pyproject.toml b/pyproject.toml
index 48385b3..0928ea3 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,31 +1,60 @@
-[tool.poetry]
+[project]
 name = "cipher-parse"
 version = "0.6.0a1"
 description = "Pre- and post-processing for the phase-field code CIPHER."
-authors = ["aplowman <adam.plowman@manchester.ac.uk>"]
 license = "MIT"
 readme = "README.md"
+requires-python = ">= 3.11"
+dependencies = [
+    "numpy>=2",
+    "ruamel.yaml>=0.19,<1",
+    "damask==3.0.0-alpha.7post0",
+    "plotly>=5.9.0",
+    "vecmaths>=0.1.6,<0.2",
+    "nbformat>=5.4.0,<6",
+    "itkwidgets>=0.25.2",
+    "pandas>=2",
+    "parse>=1.19.0,<2",
+    "ipywidgets<8.0.0",
+    "trame>=3.0.0",
+    "defdap>=1.0.0",
+    "zarr>=2.16.0",
+    "pyvista[all]>=0.43.4"
+]
+authors = [
+    {name = "Adam Plowman", email = "adam.plowman@manchester.ac.uk"}
+]
+maintainers = [
+    {name = "Donal Fellows", email = "donal.k.fellows@manchester.ac.uk"}
+]
+
+[project.optional-dependencies]
+hickle = ["hickle"]
+matflow = ["hickle", "matflow", "sqlalchemy"]
+notebook = ["notebook"]
+
+[tool.poetry]
 include = [
     "cipher_parse/example_data/dream3d/2D/synthetic_d3d.dream3d",
     "cipher_parse/example_data/dream3d/3D/synthetic_d3d.dream3d",
 ]
 
 [tool.poetry.dependencies]
-python = ">=3.8,<3.11"
-numpy = "<2"
-"ruamel.yaml" = "^0.17.21"
+python = ">=3.11,<4"
+numpy = ">=2"
+"ruamel.yaml" = "^0.19"
 damask = "3.0.0-alpha.7post0"
-plotly = "^5.9.0"
+plotly = ">=5.9.0"
 vecmaths = "^0.1.6"
 nbformat = "^5.4.0"
 itkwidgets = ">=0.25.2"
 notebook = {version = "^6.5.1", optional = true}
-pandas = "^1.5.1"
-parse = "^1.19.0"
+pandas = ">=2"
+parse = ">=1.19.0,<2"
 ipywidgets = "<8.0.0"
-trame = "^2.4.2"
-defdap = "^0.93.5"
-zarr = "^2.16.0"
+trame = ">=3.0.0"
+defdap = ">=1.0.0"
+zarr = ">=2.16.0"
 pyvista = {extras = ["all", "trame"], version = "^0.43.4"}
 
 [tool.poetry.group.dev.dependencies]
@@ -40,16 +69,11 @@ sphinx-jinja = "^2.0.1"
 sphinx-copybutton = "^0.5.0"
 black = "^22.3.0"
 
-[tool.poetry.extras]
-hickle = ["hickle"]
-matflow = ["hickle", "matflow", "sqlalchemy"]
-notebook = ["notebook"]
-
 [tool.commitizen]
 name = "cz_conventional_commits"
 version = "0.6.0a1"
 tag_format = "v$version"
-version_files = [ 
+version_files = [
     "pyproject.toml:version",
     "cipher_parse/_version.py"
 ]
@@ -58,6 +82,9 @@ bump_message = "bump: $current_version → $new_version [skip ci]"
 [tool.black]
 line-length = 90
 
+[tool.flake8]
+max-line-length = 90
+
 [build-system]
 requires = ["poetry-core>=1.0.0"]
 build-backend = "poetry.core.masonry.api"